DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvr and kdrl

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_571547.1 Gene:kdrl / 796537 ZFINID:ZDB-GENE-000705-1 Length:1301 Species:Danio rerio


Alignment Length:1565 Identity:380/1565 - (24%)
Similarity:611/1565 - (39%) Gaps:477/1565 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VPLQQFSPDPDDSIENCGGENGAPLMTPCKSAIILDAQTSTTLKCEDDEPMSWWTSQSQYVHVKS 88
            :|..|..||.|..:::.|            ..:.|..:.||.|.         |...|:.|....
Zfish    31 LPDPQLLPDGDTHLQHVG------------ETLTLICRGSTALH---------WRLASRNVSSVR 74

  Fly    89 FDNTEDPARPFGTSLHLIEVTADYVAAYYCVKTSKFSQIAKEEQSDEAMIELVNQGYASSIYVYV 153
            .::.|:......:.|.:..:..:....|.|         :.::.||..:          |.||:|
Zfish    75 IESCEERLHKHCSKLVIHNLRHNDTGIYSC---------SHKKSSDHEV----------STYVFV 120

  Fly   154 NDPDTKLVDS----HNVVTARQYTDVVIPCKPAMPDTEVLLETSNGEMHSSKSVG-RYDPQRGFT 213
            .||....|::    |.:...|.....|:||:...|:..|:|||....|......| ::||::|||
Zfish   121 KDPHHPFVEAYSLPHPLFAYRNDPYFVVPCRTTYPNQNVILETQMNPMADDVKRGVQWDPKKGFT 185

  Fly   214 IEIRSIVDGGDYYCRPNPPFPH--------NEEEMTSI--------EVRFIATGLDIPRTQTTNM 262
            :.::..    |.|        |        :..|.:|:        |::.:|...:.||      
Zfish   186 VPLKPY----DSY--------HLITCLTRVDNAEFSSVYLLKRLTMEIKNLAIEPERPR------ 232

  Fly   263 VYTYAPGVTDGDDEVLTVTNQSTGNLALIRGG----DGTLSRERARRSPARLAPMNASPSPRPGQ 323
                   |..||..:|..:.::|.|      |    :....:||..|                  
Zfish   233 -------VLVGDTLILNCSAETTYN------GRIHFEWEFHKERINR------------------ 266

  Fly   324 DGKPLPKPVIRSSVEHHVFTDTNFTLDCEQSAYVESVYGMEWFTPSRDENRIFASQSRTDPKTRN 388
                          .||..|                       ||.:....:..|::        
Zfish   267 --------------PHHFST-----------------------TPVQLAQIMVMSKA-------- 286

  Fly   389 STHQTGRSTLTVLNAQPSDTGLYKCVTTDNSNQNVQRATYRIKVLKQNESYLNVGEPSGHYNVQE 453
                     |.|.|....|.|.|.| |.....:.:|.:|   ||:.....:|||     .:|.::
Zfish   287 ---------LIVPNVTMEDKGTYTC-TGSIEFKKLQMST---KVIVYEHPFLNV-----THNKRK 333

  Fly   454 YAN----RTIQMTANFEGFPTPS-FSWFKPDGTEVRQSENNFKILSTELSTMLQVLNAQLQDSGT 513
            :.:    |.:|........|.|. ..|:| ||..:.::...::.....| |:.||   :.:|:|.
Zfish   334 FTSTVEGRRVQFEPRVNAVPAPDRVLWYK-DGVAISENSTCYETAGYNL-TIKQV---RQKDAGI 393

  Fly   514 YVLRGSNSFGVVQR--EYNVSVMDAPALKMSDA---------YVQVGSVARLECTVRSYPPAIVT 567
            :.:..||....:.|  .|.:.|...|.:...|.         |.|   ..:|.||....|...:|
Zfish   394 FTIALSNQERGLYRNISYKLEVRVKPKIFEEDVAPAGPQTFRYDQ---RHKLTCTAFGIPMPNIT 455

  Fly   568 FFFRPCSLEPQWPTCSVLNQNFSLPSEQEKYQFQTRP------RPGKL-SVERIYEVSFLPTE-- 623
            :|::||........|.:...  .||.|... .|...|      :.|.| |..|......:.|.  
Zfish   456 WFWQPCDPSANLTECKLYTD--PLPIENVD-DFPQNPIKDVNSKVGLLKSKNRTISTLVVKTANV 517

  Fly   624 PGILTCIAQNIIDGKERRTLTKAHVLLGNISENMTIYGFDKDHKIAKE-------DNVNFTCEAL 681
            .|:.:|.|:|               .|||.:..:..|..|.......|       |::..||...
Zfish   518 SGVYSCTARN---------------ELGNRTMRIPFYVDDHPQPFEIEPSTAVAGDDITLTCRGT 567

  Fly   682 AYHFDGNLKWF--INGEDLKESDSVHIETSHTKYSYKSTVHITTISDRDRGTYECRAYHNDKDAV 744
            .|.:| .|.|:  :..:..|:..::.||    .|:...::.:..:|......|||:|.:.:.:.|
Zfish   568 RYLYD-RLTWYDPLGYKVPKDETTLRIE----PYTISLSIKLPNVSRNHTLGYECQALNINTNKV 627

  Fly   745 YSSREIDLYVHDPSAPQW-----TNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRWFKDDKEV 804
            .:.... |.:.:...| |     ||  |:.:|      |.||.|.|.:..||...:.|:||...|
Zfish   628 VNVTSA-LTIDERQGP-WLMQNLTN--QDVNS------SSTLTLACLAYGVPAPFITWYKDKTPV 682

  Fly   805 TESKLRHIIEKESKLLITHLYPGDEGVYKCVVENRLDRIERS--FTVVISD-----------LPG 856
            ||.. ...::.:..|:|..:...|||:|:|...|.....:.|  .|||..|           ..|
Zfish   683 TEGP-GITLKDDGTLIIERVKKDDEGIYECRASNDGGEAKTSAVITVVGEDGKPNIEVIILVSTG 746

  Fly   857 ISMAWVWFGVILFLILIGLCVFLAVRYQKEHKRHLALKAAGLANFEEGAVGHI-NPD-LTLDEQA 919
            .:..::|..:|||:                    ..|:....|:.:.|.:..| :|: :.||||.
Zfish   747 AAATFLWIMLILFI--------------------RKLRKPSSADLKTGYLSIIMDPEQMPLDEQC 791

  Fly   920 ELLPY-NREFEFPRENLKLGKQLGAGAFGVVLKGEAKGIRREEPTTTVAVKMVKATADNEVVRAL 983
            :.||| :.::|||::.|:|||.||.||||.|::..|.||.:.....||||||:|..|.|...|||
Zfish   792 DRLPYDSNKWEFPQDRLRLGKTLGHGAFGKVVEASAFGIDKISTCKTVAVKMLKVGATNNEWRAL 856

  Fly   984 VSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDH 1048
            :|||||::|:|.||||||||||.||.  ...||:|||:|::||:.|:|...|..|:         
Zfish   857 MSELKILIHIGHHLNVVNLLGACTKR--GGPLMIIVEFCKYGNLSNYLRSKRGDFV--------- 910

  Fly  1049 IDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRA 1113
                           :::..:|                                         :|
Zfish   911 ---------------VYKSQDG-----------------------------------------KA 919

  Fly  1114 GRTGSG-TATYSYDRQMDTCATVMTTVP----EDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVD 1173
            .|:.|| ..:....|::::.|:..::..    ||.....:...:......||      ..:|..|
Zfish   920 VRSSSGCDLSELIKRRLESVASTGSSASSGFIEDKSYCDSEEEEEEQEDLYK------KVLTLED 978

  Fly  1174 LISWAFQVARGMDYLSSKKVLHGDLAARNILLCEDNVVKICDFGLARSMYRGDNYKKSENGKLPI 1238
            ||.::||||:||::|:|:|.:|.|||||||||.|:||||||||||||.:|:..:|.:..:.:||:
Zfish   979 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDVYKDPDYVRKGDARLPL 1043

  Fly  1239 KWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKPKFANQE 1303
            ||:|.|::.|.:::|.|||||:|:::||:|||...||||:..::|...:|.:|.||:.|::::.|
Zfish  1044 KWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGASPYPGLHIDEEFCCRLKEGTRMKAPEYSSSE 1108

  Fly  1304 LYEIMLECWRKNPESRPLFAELEKRFANMLGEDV---ASHYLDLN-------NPYMQS------- 1351
            :|:.||:||...|..||.|.||.:|..::|...|   ..||:.:|       :|..||       
Zfish  1109 IYQTMLDCWHGEPSQRPTFTELVERLGDLLQASVQQEGKHYIPINTALLTKADPSNQSPTEETST 1173

  Fly  1352 ------------NIEY------------------------------------------------- 1355
                        ||:.                                                 
Zfish  1174 RPVSLRDSGTAWNIKIRPESVKTFDEVILENGTNKIHEGGQSDSGIGLSSDDLKTLKRLESLARP 1238

  Fly  1356 -------MKKQSTDYLALMGSPDELAPAAPRYVNGHIVPDIRIEEL-----------PDDYMEMS 1402
                   ||::|.:.:.|.|..|:..|         :||.:.:|:.           |.||..:.
Zfish  1239 RSFMSRAMKRKSKESVLLEGEMDKYPP---------LVPSLSLEDSSLDSEMECHSPPPDYNYVV 1294

  Fly  1403 RDSDP 1407
            |.|.|
Zfish  1295 RYSTP 1299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652 13/85 (15%)
Ig <363..432 CDD:299845 13/68 (19%)
Ig 466..533 CDD:299845 16/69 (23%)
IG_like 672..754 CDD:214653 18/83 (22%)
Ig 674..739 CDD:143165 15/66 (23%)
IGc2 779..840 CDD:197706 20/60 (33%)
PKc_like 927..1332 CDD:304357 151/409 (37%)
Pkinase_Tyr 935..1329 CDD:285015 147/398 (37%)
kdrlNP_571547.1 IG_like 47..120 CDD:214653 17/112 (15%)
IG_like 228..319 CDD:214653 30/185 (16%)
Ig 236..321 CDD:299845 27/166 (16%)
IG_like 338..415 CDD:214653 18/81 (22%)
Ig 343..415 CDD:299845 17/76 (22%)
Ig 441..533 CDD:143165 26/109 (24%)
IG_like 553..631 CDD:214653 17/82 (21%)
I-set 646..728 CDD:254352 26/90 (29%)
Ig 659..725 CDD:143165 20/66 (30%)
PKc_like 800..1141 CDD:304357 152/413 (37%)
Pkinase_Tyr 808..1134 CDD:285015 147/398 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1158..1178 3/19 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1265..1291 6/34 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 295 1.000 Domainoid score I1456
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H136317
Inparanoid 1 1.050 426 1.000 Inparanoid score I1729
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D126783at33208
OrthoFinder 1 1.000 - - FOG0001573
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X787
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.970

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