DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvr and TIE1

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_005415.1 Gene:TIE1 / 7075 HGNCID:11809 Length:1138 Species:Homo sapiens


Alignment Length:983 Identity:231/983 - (23%)
Similarity:369/983 - (37%) Gaps:279/983 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 PSGHYNVQ--------EYANRTIQMTANFE----------GFPTP---SFSWFKPDGTEVRQSEN 488
            |||.:.|.        :..|...::..|.|          |.|.|   |....|||||.:..:: 
Human   336 PSGWHGVHCEKSDRIPQILNMASELEFNLETMPRINCAAAGNPFPVRGSIELRKPDGTVLLSTK- 399

  Fly   489 NFKILSTELSTM-LQVLNAQLQDSGTYVLRGSNSFGVVQREYNVSV------MDAPAL--KMSDA 544
              .|:..|.:|. .:|....|.|||.:..|.|.|.|...|.:.|:|      :.||.|  |.|..
Human   400 --AIVEPEKTTAEFEVPRLVLADSGFWECRVSTSGGQDSRRFKVNVKVPPVPLAAPRLLTKQSRQ 462

  Fly   545 YVQVGSVARLECTVRSYPPAIVTFFFRPCSLEPQWPTCSV-LNQNFSLPSEQEKYQFQTR---PR 605
            .|    |:.|.......|.:.|...:||......|.|..| .::|.:|.:.:.|..:..|   .|
Human   463 LV----VSPLVSFSGDGPISTVRLHYRPQDSTMDWSTIVVDPSENVTLMNLRPKTGYSVRVQLSR 523

  Fly   606 PGKLSVERIYEVSFLPT----EPGILTCIAQNIIDGKERRTLTKAHVLLGN--ISENMTIYGFDK 664
            ||: ..|..:....|.|    ||.:...:....::|.:|..::.:..|:..  :.:...:..:|.
Human   524 PGE-GGEGAWGPPTLMTTDCPEPLLQPWLEGWHVEGTDRLRVSWSLPLVPGPLVGDGFLLRLWDG 587

  Fly   665 DHKIAKEDNV-----------------NFTCEALAYHFDGNLKWFINGEDLKESDSVHIETSHTK 712
            .....:.:||                 ::..:...||..      :.|   ..|...|:....:.
Human   588 TRGQERRENVSSPQARTALLTGLTPGTHYQLDVQLYHCT------LLG---PASPPAHVLLPPSG 643

  Fly   713 YSYKSTVHITTISDRDRGTYECRAYHNDKDAVYSSREIDLYVHDPSA------------------ 759
            ......:|...:||                     .||.|....|.|                  
Human   644 PPAPRHLHAQALSD---------------------SEIQLTWKHPEALPGPISKYVVEVQVAGGA 687

  Fly   760 --PQWTNGGQ-EGHSKIKRKLSQTLELECASTAVPVAIVRWFKDDKEVTESKLRHIIEKESKLLI 821
              |.|.:..: |..|.|.|.|:.:........|....:..|   ...|.||.|.:.::.|.    
Human   688 GDPLWIDVDRPEETSTIIRGLNASTRYLFRMRASIQGLGDW---SNTVEESTLGNGLQAEG---- 745

  Fly   822 THLYPGDEGVYKCVVENRLDRIERSFTVVISDLPGISMAWVWFGVILFLILIGLCVFLAVRYQKE 886
                |..|   ....|..||:     .::::.:..:|       .....||..|...:.:|....
Human   746 ----PVQE---SRAAEEGLDQ-----QLILAVVGSVS-------ATCLTILAALLTLVCIRRSCL 791

  Fly   887 HKRHLALKAAGLANFEEGAVGHINPDLTLDEQAELLPYNREFEFP---RENLKLGKQLGAGAFGV 948
            |:|......:|  :.||..:...:..|||..:.:|.|  ....:|   .|::.....:|.|.||.
Human   792 HRRRTFTYQSG--SGEETILQFSSGTLTLTRRPKLQP--EPLSYPVLEWEDITFEDLIGEGNFGQ 852

  Fly   949 VLKGEAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKR 1013
            |::..   |:::......|:||:|..|.....|....||:::..||.|.|::||||| .||  :.
Human   853 VIRAM---IKKDGLKMNAAIKMLKEYASENDHRDFAGELEVLCKLGHHPNIINLLGA-CKN--RG 911

  Fly  1014 ELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANV 1078
            .|.:.:||..:||:.:||.::|                                           
Human   912 YLYIAIEYAPYGNLLDFLRKSR------------------------------------------- 933

  Fly  1079 GFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDD 1143
                                                                        |.|.|
Human   934 ------------------------------------------------------------VLETD 938

  Fly  1144 QIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCED 1208
                     ||:...:.|    |.|:::..|:.:|...|.||.|||.|:.:|.||||||:|:.|:
Human   939 ---------PAFAREHGT----ASTLSSRQLLRFASDAANGMQYLSEKQFIHRDLAARNVLVGEN 990

  Fly  1209 NVVKICDFGLARSMYRGDN-YKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAK 1272
            ...||.||||:    ||:. |.|...|:||::|:|:|||:..|::|.|||||:|::|||:.||..
Human   991 LASKIADFGLS----RGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGG 1051

  Fly  1273 VPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEKRFANMLGEDV 1337
            .||.|: ...||:.||..|||||:|:..:.|:||:|.:|||..|..||.||::..:...||  :.
Human  1052 TPYCGM-TCAELYEKLPQGYRMEQPRNCDDEVYELMRQCWRDRPYERPPFAQIALQLGRML--EA 1113

  Fly  1338 ASHYLDLN 1345
            ...|::::
Human  1114 RKAYVNMS 1121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845 24/80 (30%)
IG_like 672..754 CDD:214653 13/98 (13%)
Ig 674..739 CDD:143165 9/81 (11%)
IGc2 779..840 CDD:197706 10/60 (17%)
PKc_like 927..1332 CDD:304357 117/408 (29%)
Pkinase_Tyr 935..1329 CDD:285015 115/394 (29%)
TIE1NP_005415.1 ig 129..210 CDD:278476
EGF_CA 227..256 CDD:238011
EGF_2 315..344 CDD:285248 4/7 (57%)
ig 356..441 CDD:278476 24/87 (28%)
fn3 452..536 CDD:278470 23/88 (26%)
fn3 548..632 CDD:278470 9/92 (10%)
FN3 644..736 CDD:238020 19/115 (17%)
PTKc_Tie1 836..1132 CDD:270671 119/415 (29%)
TyrKc 839..1107 CDD:197581 115/394 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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