DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and si:ch73-206d17.1

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:XP_689652.2 Gene:si:ch73-206d17.1 / 561155 ZFINID:ZDB-GENE-090313-143 Length:393 Species:Danio rerio


Alignment Length:506 Identity:105/506 - (20%)
Similarity:180/506 - (35%) Gaps:157/506 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   866 VILFLILIGLCVFLAVR---YQKEHKRHLALK-AAGLANFEEGAVGHINPDLTLDEQAELLPYN- 925
            ||:...|:.|...:.|.   :....||..|.| .:..:|..|..  |:..|..:   ..|.|.| 
Zfish    27 VIIIPSLLALSTLIVVSQIIWSFVTKRSSAQKITSSSSNVNERE--HVQLDAGI---GSLRPANV 86

  Fly   926 -REFEFPRE-NLKLGKQLGAGAFGVVLKGEAKGIRREEPTTTVAVKMVKATADNEVVRALVSELK 988
             ...|.|.: .|:..:.|..|.:|.:..|:   ::::..:|.|.:|.:|..:........:..:.
Zfish    87 LGPLELPVQCTLEGVEVLQMGRYGPICMGQ---LKQDNTSTAVMIKTLKDRSTQSESAEFMDLVL 148

  Fly   989 IMVHLGQHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFL--LRNRKCFINQINPDTDHIDP 1051
            ....:.:|.|:|.||...|:   :..:.:::|....||:.|||  ||..:|              
Zfish   149 FHAAVSKHENIVKLLFCQTR---RTPMYLLLEASVPGNLLNFLWSLREDRC-------------- 196

  Fly  1052 SIMTQRMSDNYELHRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRT 1116
                                                                             
Zfish   197 ----------------------------------------------------------------- 196

  Fly  1117 GSGTATYSYDRQMDTCATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQV 1181
                                    .:..:.|..||                       ...|.|:
Zfish   197 ------------------------GESSVFSEKSV-----------------------FLVAKQI 214

  Fly  1182 ARGMDYL-SSKKVLHGDLAARNILLCEDNVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALES 1245
            |.|:||| |..:|:|||:||||:|:.....||:.....|....:.....:.:...:|:||.|.|.
Zfish   215 AAGLDYLHSHHRVIHGDVAARNMLIGSAFSVKVSGLDFAFESRQKKKVDREQEANVPVKWQAPER 279

  Fly  1246 LSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLE 1310
            :.....:..|||||:||:|:||.:|...|||.:||::.|...|.. |||::|:.....|::::..
Zfish   280 MMRLPLTDRSDVWSFGILLYEMITLGSPPYPDLDPSEVLPRTLAH-YRMKRPENCGAPLFDLIKY 343

  Fly  1311 CWRKNPESRPLFAELEKRFANMLGEDVASHYLDLNNPYMQSNI---EYMKK 1358
            |...|.:.||:::.:.:..      |..|::.|......:..|   ||.||
Zfish   344 CCMWNFKDRPVYSAIIRLL------DSYSYFADTKPLCSEVQIDVSEYKKK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845
IG_like 672..754 CDD:214653
Ig 674..739 CDD:143165
IGc2 779..840 CDD:197706
PKc_like 927..1332 CDD:304357 81/408 (20%)
Pkinase_Tyr 935..1329 CDD:285015 79/396 (20%)
si:ch73-206d17.1XP_689652.2 PKc_like 102..363 CDD:304357 78/399 (20%)
Pkinase_Tyr 102..362 CDD:285015 78/392 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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