DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvr and kitb

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_001137390.1 Gene:kitb / 497629 ZFINID:ZDB-GENE-050916-2 Length:957 Species:Danio rerio


Alignment Length:1080 Identity:289/1080 - (26%)
Similarity:457/1080 - (42%) Gaps:254/1080 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 KPVIRSSVEHHV-FTDTNFTLDCEQSAYVESVYG-MEWFTPSRDENRIFASQSRTDPKTRNSTHQ 392
            ||||.....|.| .......|.|...|.|.:  | :.|.   ||:.|....:.:.|         
Zfish    22 KPVITPDAPHLVILKGKQLYLRCHDDADVNA--GRVRWL---RDKGRRIEGELKDD--------- 72

  Fly   393 TGRSTLTVLN-AQPSDTGLYKCVTTDNSNQN-------------VQRATYRIKVLKQNESYLN-- 441
              .:::.:|| .:....|.|.|..|:...::             |:|....::|.|..|..|.  
Zfish    73 --EASVILLNITETQHMGNYTCENTETEEKSSIYIYVKDLGSAFVRRMVNDLQVRKGEEITLPCL 135

  Fly   442 VGEPS-GHYNVQEYANRTIQMTANFEGFPTP-SFSWFKPDGTEVRQSENNFKILSTELSTMLQVL 504
            |.:|: .|.::|         |.|....|.. :|......|..:|.....|:             
Zfish   136 VTDPAVSHLSLQ---------TCNGSALPAALTFITHPQGGITIRNVSKAFE------------- 178

  Fly   505 NAQLQDSGTYVLRGS-NSFGVVQREYNVSVMDAPALKMSDAYVQVGSVARLECTVRSYPPAIVTF 568
                   |.|...|. :...|..||||:.|..||      ..|...|::|.|..:     .|...
Zfish   179 -------GCYFCAGQLDQKPVKSREYNLVVRLAP------ESVPAISLSRNENVI-----LIQDQ 225

  Fly   569 FFRPCSLEPQWPTCSVLNQN------FSLPSEQEKYQ-FQTRPRPGKLSVER---IYEVSFLPTE 623
            .|:        .:||.:|.|      :::|||....: .::..:||....:|   ::..|....:
Zfish   226 EFK--------LSCSAVNINHDFHLRWTIPSEATALESHKSNIQPGSREYQRSITLWIQSVKIND 282

  Fly   624 PGILTCIAQNIIDGKERRTLTKAHVLLGNISENMTIY---------GFDKDHKIAKEDNVNFTCE 679
            .|...|.|:|      .:.::.|.|       |:.:|         |.::..::.:.:::..:.|
Zfish   283 TGSYRCNARN------EKGVSMAAV-------NLEVYERGFINLTEGENRVVEVREGESLTLSVE 334

  Fly   680 ALAYHFDGNLKWFINGEDLKESDSVHIETSHT-KYSYKSTVHITTISDRDRGTYECRAYHNDKDA 743
            ..:|....::.|..|.::| ::.|.|:.|.|. :|.|.|.:.:..:...:.|.|...|.|.    
Zfish   335 ITSYPKPNDVLWTYNNQEL-QNTSEHVITLHNQQYRYISELRLVRVHGSEGGIYTFSANHK---- 394

  Fly   744 VYSSREIDLYVHDPSAPQWTNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRWFKDDKEVTESK 808
             |.|......||....|...:  |||        ....::.|.::..||..:.|:.  .|...::
Zfish   395 -YESVNQSFTVHVICKPVIVS--QEG--------PVDGQVRCVASGYPVPKISWYY--CEPPHTR 446

  Fly   809 LRHII----------------------EKESKLLITHLYPGDEGVYKCVVENRLDRIERSFTVVI 851
            ..|::                      |.||:|.|:   .|.....:||...:.::....|::..
Zfish   447 CSHLLNATQADEEFAVITVSGSEFGRSEVESRLNIS---KGKFHTLECVASAQGEQAYTLFSISE 508

  Fly   852 SDLPGISMAWVWFGVILFLILIG-LCVFLAVRYQKEHKRHLALKAAGLANFEEGAVGHINPDLTL 915
            ..:|......:..||:...:|:. :.|.|..:|.::.|..:..|.  :.:|:.....:|:|    
Zfish   509 RTVPHKLFTPLLSGVVSTSVLLSFILVVLLYKYMQKPKYEIHWKV--IDSFDGNNYTYIDP---- 567

  Fly   916 DEQAELLPYNREFEFPRENLKLGKQLGAGAFGVVLKGEAKGIRREEPTTTVAVKMVKATADNEVV 980
                ..|||:.::|||||.|:.||.||:||||.|:...|.|:...:..|||||||:|.:|.:...
Zfish   568 ----TQLPYDPKWEFPRERLRFGKILGSGAFGKVVAATAYGLCSADTVTTVAVKMLKPSAHSTEK 628

  Fly   981 RALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPD 1045
            .||:||||::.::|.|:|:||||||.|   .....:||.|||.:|::.|||.|.|..|       
Zfish   629 EALMSELKVLSYIGNHINIVNLLGACT---VGGPTLVITEYCCYGDLLNFLRRKRDAF------- 683

  Fly  1046 TDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSG 1110
                    .:.:..|.|            |.|:            .:.|||..  ..:||    |
Zfish   684 --------FSSKTGDGY------------YKNL------------LSQTQPSI--EGTDN----G 710

  Fly  1111 TRAGRTGSGTATYSYDRQMDTCATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLI 1175
            ....|        ||.::                     |.|..|     .|..:.:::.|.||:
Zfish   711 YMPMR--------SYQKR---------------------SNQTEW-----CDDKDDLSLDTEDLL 741

  Fly  1176 SWAFQVARGMDYLSSKKVLHGDLAARNILLCEDNVVKICDFGLARSMYRGDNYKKSENGKLPIKW 1240
            |:::|||:|||:|:||..:|.||||||:||.:..|.|||||||||.:.|..||....|.:||:||
Zfish   742 SFSYQVAKGMDFLTSKNCIHRDLAARNVLLTQGRVAKICDFGLARDITRDSNYVLRGNARLPVKW 806

  Fly  1241 LALESLSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELY 1305
            ::.|||...|::..||||||||:|||:|||...|||||......:..:.|||||.:|:||..|:|
Zfish   807 MSPESLFACVYTFESDVWSYGILLWEIFSLGNTPYPGIPVGSTFYKMIQDGYRMSEPEFAPSEIY 871

  Fly  1306 EIMLECWRKNPESRPLFAELEKRFANMLGEDVASHYLDLN 1345
            |:|..||..:|..||.|.:|.:|...:|.|.....||:|:
Zfish   872 EVMRWCWSADPLKRPPFKKLVERTELLLSETTKHDYLNLS 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652 18/100 (18%)
Ig <363..432 CDD:299845 13/82 (16%)
Ig 466..533 CDD:299845 13/68 (19%)
IG_like 672..754 CDD:214653 18/82 (22%)
Ig 674..739 CDD:143165 15/65 (23%)
IGc2 779..840 CDD:197706 14/82 (17%)
PKc_like 927..1332 CDD:304357 154/404 (38%)
Pkinase_Tyr 935..1329 CDD:285015 148/393 (38%)
kitbNP_001137390.1 IG_like 121..201 CDD:214653 23/108 (21%)
Ig 209..305 CDD:299845 23/121 (19%)
IG 225..305 CDD:214652 19/100 (19%)
Ig 309..407 CDD:299845 21/103 (20%)
I-set 319..406 CDD:254352 19/92 (21%)
PKc_like 547..896 CDD:304357 161/440 (37%)
Pkinase_Tyr 583..894 CDD:285015 148/392 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 295 1.000 Domainoid score I1456
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D126783at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25366
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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