DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and Y50D4B.6

DIOPT Version :10

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_503375.2 Gene:Y50D4B.6 / 3565593 WormBaseID:WBGene00021745 Length:421 Species:Caenorhabditis elegans


Alignment Length:565 Identity:129/565 - (22%)
Similarity:220/565 - (38%) Gaps:191/565 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   843 IERSFTVVISDLPGISMAWVWFGVILFLILIGLCVFLAVRYQKEHKRHLALKAAGL--------- 898
            |:|:..|:...:..|:::.:::.|..|..|          .::||:...:|::..:         
 Worm     2 IDRNILVIFYCIVVIALSVLFYYVWKFYYL----------RKEEHEETRSLESGIIHSSSQKTPS 56

  Fly   899 ----------ANFEEGAVG-------HINPDLTLDEQAELLPYNREFEFPRENLKLGKQLGAGAF 946
                      ||.|...:|       .|..:|..||:.| :..|: |.|  .||..   ||.|.:
 Worm    57 SVRENESLLQANEENVPIGLETEPINAIIKNLKFDERFE-IDVNK-FSF--YNLSF---LGNGYY 114

  Fly   947 GVVL-----KGEAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAV 1006
            |.|.     |.:..|:..|. :..||||......|....:.:..||.:|..:|:|.|::.|:..:
 Worm   115 GKVFKERMHKKQKNGLDSEN-SLEVAVKRALRPEDPSEQQLMCEELNVMCVVGKHPNILALIRWI 178

  Fly  1007 TKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGG 1071
            ..|    |::::.|:...|::..:|...|:.|    |.|...::         ||..|       
 Worm   179 RTN----EILIVSEFVEKGDLVEYLRARRRYF----NKDIVCVE---------DNGRL------- 219

  Fly  1072 GLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVM 1136
                                                                       .|.|  
 Worm   220 -----------------------------------------------------------LCPT-- 223

  Fly  1137 TTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAAR 1201
                                                ||:|:|||:|.||.:|.:...:|.|||.|
 Worm   224 ------------------------------------DLLSFAFQIANGMKFLGNVACVHRDLALR 252

  Fly  1202 NILLCEDNVVKICDFGLARSMYRGDNYKKSENGKLPIKWLA-----LESLSDHV-FSTYSDVWSY 1260
            |:.:..:.:::|.||||||.....:.|:|..:...|:||||     .|...::: |.:.||:|||
 Worm   253 NVFVKRNRIIRIADFGLARWHENKEYYRKKTDVGFPMKWLAPECFEFEQERENIKFDSKSDIWSY 317

  Fly  1261 GIVLWEMFSLAKVPYPGID--PN--QELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPL 1321
            |:.|:|:|||...||.|:|  |:  |.|...:.||.::..|:..:.::||.|..||..||:.||:
 Worm   318 GVCLYEIFSLGVSPYEGLDFRPDYFQGLMKYVRDGNQLPSPEHGSDKIYEFMQSCWNLNPDKRPV 382

  Fly  1322 FAELEKRFANMLGEDVASHYLDLNNPYMQS---NIEYMKKQSTDY 1363
            |:|....|..:|.:        ::.|:.::   .|:..:|..|.|
 Worm   383 FSECRDFFQKLLQQ--------VSKPFFENLLKEIQNEEKLQTSY 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG_like 346..432 CDD:214653
Ig strand C 363..366 CDD:409353
Ig strand E 396..400 CDD:409353
Ig strand F 410..415 CDD:409353
Ig strand G 425..428 CDD:409353
Ig 458..533 CDD:472250
Ig strand B 459..463 CDD:409353
Ig strand C 472..476 CDD:409353
Ig strand E 497..503 CDD:409353
Ig strand F 513..518 CDD:409353
Ig 671..>742 CDD:472250
Ig strand B 674..678 CDD:409353
Ig strand C 687..691 CDD:409353
Ig strand E 717..721 CDD:409353
Ig strand F 731..736 CDD:409353
Ig 779..851 CDD:472250 3/7 (43%)
Ig strand B 781..785 CDD:409570
Ig strand C 794..798 CDD:409570
Ig strand E 816..821 CDD:409570
Ig strand F 831..836 CDD:409570
Ig strand G 844..847 CDD:409570 1/2 (50%)
Protein Kinases, catalytic domain 927..1332 CDD:473864 103/419 (25%)
Y50D4B.6NP_503375.2 PTKc 109..391 CDD:270623 98/403 (24%)
Blue background indicates that the domain is not in the aligned region.

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