DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and CG3277

DIOPT Version :10

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster


Alignment Length:864 Identity:203/864 - (23%)
Similarity:351/864 - (40%) Gaps:221/864 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   580 PT-CSVLNQNFSLPSEQEKYQFQT---RPRPGKLSVERIYEVSFLPTEPGILTCIAQNIIDGKER 640
            || .|::..:...|.:.|.:::.|   .|    :::|.:..:...|...|.:|.:..|:      
  Fly    35 PTLISLVRSSEKEPEQMESHRYVTGLSEP----IAMEPLTRMRLNPNPDGEITELTTNV------ 89

  Fly   641 RTL-------------------TKAHVLLGNISEN------MTIYGFD------KDHKIAKEDNV 674
             ||                   |..:||:..::.:      .:.||..      :.|.:....|.
  Fly    90 -TLYMEKIPRLQVRWQDNLPQGTSYNVLVSAVNNSRCPDAPCSEYGIKEKNASAETHSVNLPVNP 153

  Fly   675 NFTCEALAYHFDGNLKWFINGEDLKESDSVHIETSHTKYSYKSTVHITTISDRDRGTYECRAYHN 739
            |...|::..::....::           .|.:|||:......:.|:|....:   |...|:....
  Fly   154 NLNVESVDCNYMFGCQY-----------QVIVETSNAMVRRSARVYIPQCLE---GKCSCQLAPT 204

  Fly   740 DKDAVYSSR-------EIDLYVHDPSAPQWTNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRW 797
            ....:..::       .|:|.:   .|.:.....|:.|      |.:||              |.
  Fly   205 PPKVLAVAKMLSNETISINLSI---LASELLRKEQDSH------LHETL--------------RT 246

  Fly   798 FKDDKEVTESK---------LRHI---IEKESKLLITHLYPGDEGVYKCVVENRL-DRIERSFTV 849
            :|...::.|..         |:|:   :.|.|:|.......|.|||.|..:..:| ::...|...
  Fly   247 YKMQLKINEETNPSLPWGGVLKHLMTRVYKLSELNFRATPKGFEGVMKLGLGTQLKEKASLSLQA 311

  Fly   850 VISDLPGI-------------------------SMAWVWFGVILFLILIGLCVFL--------AV 881
            ||.|..|.                         :...|...:::.:||.||.:.|        ..
  Fly   312 VIIDPTGCEGPRSVTKVPVPANPVLLTEGDSVSNSIIVMSAMLIAIILAGLIMLLLRRRRARTTA 376

  Fly   882 RYQKEHKRHLALKAAGLANFEEGAVGHINPDLTLDEQAELLPYNREFEFPRENLKLGKQLGAGAF 946
            :.:|:.:.::...|......|:. |.:::..:   |::::|.....||.|...:::|:.||.|||
  Fly   377 KLRKQEQIYIQTFATSAIEMEDN-VNYVDKYV---EKSQVLGLADIFEVPHSAIQIGRMLGEGAF 437

  Fly   947 GVVLKGEAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIA 1011
            |.|.:..|..:||...||.||||.:|.....:.|...::|::::..:|.|.|||:.||..|   .
  Fly   438 GQVHEATAINLRRMRGTTIVAVKQLKPNPKADEVAEYLAEIEMLKGVGTHHNVVSFLGCCT---I 499

  Fly  1012 KRELMVIVEYCRFGNIQNFL---------LRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRD 1067
            |...::|:||...||:.::|         ||||........|        |||:..|.:....:.
  Fly   500 KPPYLMIMEYVNKGNLLSYLRTVRKEASKLRNRNANYTSCRP--------IMTRTNSTSSPKSQS 556

  Fly  1068 TNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTC 1132
            .|...||.::      ..|..|..::|   .|        .:|.|.........||         
  Fly   557 VNYIELKASS------QTIEMPQEDST---AH--------MNGIRQPHPSFAETTY--------- 595

  Fly  1133 ATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGD 1197
                 |:.||:...           .|..|:.|        |.::|.|:|.||.:|..:::.|.|
  Fly   596 -----TIVEDEDAF-----------EYILDNKE--------LHNFALQIANGMRFLEEQEITHRD 636

  Fly  1198 LAARNILLCEDNVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGI 1262
            |||||:|:..:..:||.||||:|.    ..|..:...|||::||::|::.::|:|:.||:|:||:
  Fly   637 LAARNVLIDSNKTLKISDFGLSRH----GIYTNTRTRKLPLRWLSIEAIRENVYSSKSDIWAYGV 697

  Fly  1263 VLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEK 1327
            ||||:.:|...|||.|. |.||...|..|.|:|:|:....::|.|||:||.:.||.||.|..|.|
  Fly   698 VLWEIGTLGASPYPTIS-NDELIPFLMAGNRLERPEICTPQVYTIMLQCWLEEPEERPTFDALYK 761

  Fly  1328 RFANMLGEDVASHYLDLNN 1346
            ..:      ..:.|:|:|:
  Fly   762 VLS------PKTTYVDINS 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG_like 346..432 CDD:214653
Ig strand C 363..366 CDD:409353
Ig strand E 396..400 CDD:409353
Ig strand F 410..415 CDD:409353
Ig strand G 425..428 CDD:409353
Ig 458..533 CDD:472250
Ig strand B 459..463 CDD:409353
Ig strand C 472..476 CDD:409353
Ig strand E 497..503 CDD:409353
Ig strand F 513..518 CDD:409353
Ig 671..>742 CDD:472250 11/70 (16%)
Ig strand B 674..678 CDD:409353 1/3 (33%)
Ig strand C 687..691 CDD:409353 0/3 (0%)
Ig strand E 717..721 CDD:409353 1/3 (33%)
Ig strand F 731..736 CDD:409353 1/4 (25%)
Ig 779..851 CDD:472250 17/84 (20%)
Ig strand B 781..785 CDD:409570 1/3 (33%)
Ig strand C 794..798 CDD:409570 1/3 (33%)
Ig strand E 816..821 CDD:409570 2/4 (50%)
Ig strand F 831..836 CDD:409570 2/4 (50%)
Ig strand G 844..847 CDD:409570 0/2 (0%)
Protein Kinases, catalytic domain 927..1332 CDD:473864 130/413 (31%)
CG3277NP_608762.3 PTKc 430..763 CDD:270623 126/398 (32%)
Blue background indicates that the domain is not in the aligned region.

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