DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and CG3277

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster


Alignment Length:864 Identity:203/864 - (23%)
Similarity:351/864 - (40%) Gaps:221/864 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   580 PT-CSVLNQNFSLPSEQEKYQFQT---RPRPGKLSVERIYEVSFLPTEPGILTCIAQNIIDGKER 640
            || .|::..:...|.:.|.:::.|   .|    :::|.:..:...|...|.:|.:..|:      
  Fly    35 PTLISLVRSSEKEPEQMESHRYVTGLSEP----IAMEPLTRMRLNPNPDGEITELTTNV------ 89

  Fly   641 RTL-------------------TKAHVLLGNISEN------MTIYGFD------KDHKIAKEDNV 674
             ||                   |..:||:..::.:      .:.||..      :.|.:....|.
  Fly    90 -TLYMEKIPRLQVRWQDNLPQGTSYNVLVSAVNNSRCPDAPCSEYGIKEKNASAETHSVNLPVNP 153

  Fly   675 NFTCEALAYHFDGNLKWFINGEDLKESDSVHIETSHTKYSYKSTVHITTISDRDRGTYECRAYHN 739
            |...|::..::....::           .|.:|||:......:.|:|....:   |...|:....
  Fly   154 NLNVESVDCNYMFGCQY-----------QVIVETSNAMVRRSARVYIPQCLE---GKCSCQLAPT 204

  Fly   740 DKDAVYSSR-------EIDLYVHDPSAPQWTNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRW 797
            ....:..::       .|:|.:   .|.:.....|:.|      |.:||              |.
  Fly   205 PPKVLAVAKMLSNETISINLSI---LASELLRKEQDSH------LHETL--------------RT 246

  Fly   798 FKDDKEVTESK---------LRHI---IEKESKLLITHLYPGDEGVYKCVVENRL-DRIERSFTV 849
            :|...::.|..         |:|:   :.|.|:|.......|.|||.|..:..:| ::...|...
  Fly   247 YKMQLKINEETNPSLPWGGVLKHLMTRVYKLSELNFRATPKGFEGVMKLGLGTQLKEKASLSLQA 311

  Fly   850 VISDLPGI-------------------------SMAWVWFGVILFLILIGLCVFL--------AV 881
            ||.|..|.                         :...|...:::.:||.||.:.|        ..
  Fly   312 VIIDPTGCEGPRSVTKVPVPANPVLLTEGDSVSNSIIVMSAMLIAIILAGLIMLLLRRRRARTTA 376

  Fly   882 RYQKEHKRHLALKAAGLANFEEGAVGHINPDLTLDEQAELLPYNREFEFPRENLKLGKQLGAGAF 946
            :.:|:.:.::...|......|:. |.:::..:   |::::|.....||.|...:::|:.||.|||
  Fly   377 KLRKQEQIYIQTFATSAIEMEDN-VNYVDKYV---EKSQVLGLADIFEVPHSAIQIGRMLGEGAF 437

  Fly   947 GVVLKGEAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIA 1011
            |.|.:..|..:||...||.||||.:|.....:.|...::|::::..:|.|.|||:.||..|   .
  Fly   438 GQVHEATAINLRRMRGTTIVAVKQLKPNPKADEVAEYLAEIEMLKGVGTHHNVVSFLGCCT---I 499

  Fly  1012 KRELMVIVEYCRFGNIQNFL---------LRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRD 1067
            |...::|:||...||:.::|         ||||........|        |||:..|.:....:.
  Fly   500 KPPYLMIMEYVNKGNLLSYLRTVRKEASKLRNRNANYTSCRP--------IMTRTNSTSSPKSQS 556

  Fly  1068 TNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTC 1132
            .|...||.::      ..|..|..::|   .|        .:|.|.........||         
  Fly   557 VNYIELKASS------QTIEMPQEDST---AH--------MNGIRQPHPSFAETTY--------- 595

  Fly  1133 ATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGD 1197
                 |:.||:...           .|..|:.|        |.::|.|:|.||.:|..:::.|.|
  Fly   596 -----TIVEDEDAF-----------EYILDNKE--------LHNFALQIANGMRFLEEQEITHRD 636

  Fly  1198 LAARNILLCEDNVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGI 1262
            |||||:|:..:..:||.||||:|.    ..|..:...|||::||::|::.::|:|:.||:|:||:
  Fly   637 LAARNVLIDSNKTLKISDFGLSRH----GIYTNTRTRKLPLRWLSIEAIRENVYSSKSDIWAYGV 697

  Fly  1263 VLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEK 1327
            ||||:.:|...|||.|. |.||...|..|.|:|:|:....::|.|||:||.:.||.||.|..|.|
  Fly   698 VLWEIGTLGASPYPTIS-NDELIPFLMAGNRLERPEICTPQVYTIMLQCWLEEPEERPTFDALYK 761

  Fly  1328 RFANMLGEDVASHYLDLNN 1346
            ..:      ..:.|:|:|:
  Fly   762 VLS------PKTTYVDINS 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845
IG_like 672..754 CDD:214653 13/88 (15%)
Ig 674..739 CDD:143165 10/64 (16%)
IGc2 779..840 CDD:197706 15/72 (21%)
PKc_like 927..1332 CDD:304357 130/413 (31%)
Pkinase_Tyr 935..1329 CDD:285015 127/402 (32%)
CG3277NP_608762.3 STYKc 426..763 CDD:214568 127/402 (32%)
PTKc 430..763 CDD:270623 126/398 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455283
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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