DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvr and sev

DIOPT Version :10

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster


Alignment Length:1643 Identity:328/1643 - (19%)
Similarity:550/1643 - (33%) Gaps:584/1643 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILLPLLLILRISWSD--------AVPLQQFS-PDPDDSIENCGGENGAPLMTPCKSAIILDAQ-- 61
            :|.||..:|.:..|.        |.||.... |.||.:             :|..:..:||.|  
  Fly  1138 LLRPLGALLWLERSGRRARLVRLAAPLDVMELPTPDQA-------------SPASALQLLDPQPL 1189

  Fly    62 --------TSTTLKCE--------DDEPMSWWTSQSQYVHVKSFDNTEDPARPFGTSLHLIEVTA 110
                    ..|.|...        ||..:.|..|.|...|..|:....:    ||..|..::::.
  Fly  1190 PPRDEGVIPMTVLPDSVRLDDGHWDDFHVRWQPSTSGGNHSVSYRLLLE----FGQRLQTLDLST 1250

  Fly   111 DYVAAYYCVKTSKFSQIAKEE--------------QSDEAMIELVNQGYASSIYVYVNDPDTKLV 161
            .:         ::.:|:.:.:              ..|...::|.....|.|      .|....|
  Fly  1251 PF---------ARLTQLPQAQLQLKISITPRTAWRSGDTTRVQLTTPPVAPS------QPRRLRV 1300

  Fly   162 DSHNVVTARQYTDVVIPCKPAMPDTEVLLETSNGEMHSSKSVGRYDPQRGFTIEIR---SIVDGG 223
            ....:.||.|..:|....:...|:..........|.|.|..||....:     |:|   |.::..
  Fly  1301 FVERLATALQEANVSAVLRWDAPEQGQEAPMQALEYHISCWVGSELHE-----ELRLNQSALEAR 1360

  Fly   224 DYYCRPNPPFPHNEEEMTSIEVRFIATG--------------------------------LDIPR 256
            ..:.:|:..: |.:     :|.|..|||                                ||:..
  Fly  1361 VEHLQPDQTY-HFQ-----VEARVAATGAAAGAASHALHVAPEVQAVPRVLYANAEFIGELDLDT 1419

  Fly   257 TQTTNMVYTYAP-----GVTDGDDEVLTVTNQSTGNLALIRGGDGTLSRERARRSPARLAPMNAS 316
            .....:|:|.:|     |: :|:..:|.| |:....|..:.|.           :||:||.|.|.
  Fly  1420 RNRRRLVHTASPVEHLVGI-EGEQRLLWV-NEHVELLTHVPGS-----------APAKLARMRAE 1471

  Fly   317 PSPRPGQDGKPLPKPVIRSSVE--HHVFTDTNFTLDCEQSAYVESVYGME--------------W 365
                           |:..:|:  ..:...........|:|.   :|.::              |
  Fly  1472 ---------------VLALAVDWIQRIVYWAELDATAPQAAI---IYRLDLCNFEGKILQGERVW 1518

  Fly   366 FTP-----------SRDENRIFASQSRTDPKT-----RNSTHQTGRSTLTV-----LNAQPSDTG 409
            .||           .:.::.|:....:..|:.     ||.|..:.....||     |:|...:.|
  Fly  1519 STPRGRLLKDLVALPQAQSLIWLEYEQGSPRNGSLRGRNLTDGSELEWATVQPLIRLHAGSLEPG 1583

  Fly   410 LYKCVTTDNSNQ----NVQRATYRIKVLKQNESYL-------NVGEPSGH------YNVQEYANR 457
            .......||..:    :|.|.......|:...:.|       .:.:.||:      ::::.|..|
  Fly  1584 SETLNLVDNQGKLCVYDVARQLCTASALRAQLNLLGEDSIAGQLAQDSGYLYAVKNWSIRAYGRR 1648

  Fly   458 TIQMTANFEGFPTPSFSWFKPDGTEVRQSEN-------NFKILSTELSTMLQVLNAQLQDSGTY- 514
            ..|:....|         .:|:...:.|:.|       |..:|.:...::|:..:.:.|....: 
  Fly  1649 RQQLEYTVE---------LEPEEVRLLQAHNYQAYPPKNCLLLPSSGGSLLKATDCEEQRCLLHL 1704

  Fly   515 -VLRGSNSFGV----VQREYNVSVMDAPALKMSDAYVQ------VGSVARLECT-----VRSYPP 563
             ::..|....:    |:.:.|:::...|..:..|..::      :|:...|..|     .|....
  Fly  1705 PMITASEDCPLPIPGVRYQLNLTLAKEPGSEEHDHGMEPLGQWLLGAGESLNLTDLLPFTRYRVS 1769

  Fly   564 AIVTFFFRPCSLEPQWPTCSVLNQNFSLP----SEQEKYQFQTRPRPGK-LSVE----RIYEVSF 619
            .|::.|::               :..:||    :..|.......|.|.: .||.    |..|||:
  Fly  1770 GILSSFYQ---------------KKLALPTLVLAPLELLTASATPSPPRNFSVRVLSPRELEVSW 1819

  Fly   620 LP-----TEPGILTCIAQNIIDGK-----------ERRTLTK-AHVLLG---------------- 651
            ||     :|....|...|..:||:           |||..|. .|.|.|                
  Fly  1820 LPPEQLRSESVYYTLHWQQELDGENVQDRREWEAHERRLETAGTHRLTGIKPGSGYSLWVQAHAT 1884

  Fly   652 ----NISENMTIYGFDKDHKIAKEDNVNFTCEALAYHFDG--------NLKWFINGEDLKESDSV 704
                |.||.:.:..|   .::.:...:.....:|:..:.|        .|:...:.|.|:.    
  Fly  1885 PTKSNSSERLHVRSF---AELPELQLLELGPYSLSLTWAGTPDPLGSLQLECRSSAEQLRR---- 1942

  Fly   705 HIETSHTKYSYKSTVHITTISDRDRGTYECR------------AYHNDKDAVYSSREIDLYVHDP 757
            ::..:|||      :.:..:..|.|  |:||            .||...: ||.:  :......|
  Fly  1943 NVAGNHTK------MVVEPLQPRTR--YQCRLLLGYAATPGAPLYHGTAE-VYET--LGDAPSQP 1996

  Fly   758 SAPQ------------WT----NGGQ---------EGHSKIKRKLSQ-------TLELECASTAV 790
            ..||            ||    ||..         :..|.|:|:..:       :|| :......
  Fly  1997 GKPQLEHIAEEVFRVTWTAARGNGAPIALYNLEALQARSDIRRRRRRRRRNSGGSLE-QLPWAEE 2060

  Fly   791 PVAIVRWFKDDKEVTESKLRHIIEK--ESKLL--------ITHLYPGDEGVYKCVVENRLDRIER 845
            ||.:...:.|....||  |..|::.  .|:||        :.|.:    |.|    ....:|:..
  Fly  2061 PVVVEDQWLDFCNTTE--LSCIVKSLHSSRLLLFRVRARSLEHGW----GPY----SEESERVAE 2115

  Fly   846 SFTVVISDLPGISMAWVWFGVILFLI----LIGLCVFLAVRYQKEHKRHLALKAAGLANFEEGAV 906
            .|  |..:..|        .::|.:|    ::..||...|..:|..||.|..|.         .:
  Fly  2116 PF--VSPEKRG--------SLVLAIIAPAAIVSSCVLALVLVRKVQKRRLRAKK---------LL 2161

  Fly   907 GHINPDL-----TLDEQAELLPY-NREFE----------FPREN---LKLGKQLGAGAFGVVLKG 952
            ....|.:     ||..|.:|:.. ||.|.          .|:.|   |||.:.||:||||.|.:|
  Fly  2162 QQSRPSIWSNLSTLQTQQQLMAVRNRAFSTTLSDADIALLPQINWSQLKLLRFLGSGAFGEVYEG 2226

  Fly   953 EAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMV 1017
            :.|....||| ..||:|.::..|..  ...|:.|.::|.:. :|.|:|.|:|.            
  Fly  2227 QLKTEDSEEP-QRVAIKSLRKGASE--FAELLQEAQLMSNF-KHENIVCLVGI------------ 2275

  Fly  1018 IVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPI 1082
                               ||      ||:.|  |::.:.|          ..|.|.        
  Fly  2276 -------------------CF------DTESI--SLIMEHM----------EAGDLL-------- 2295

  Fly  1083 HSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDDQIMS 1147
             ||:......:||.|        .|.:|                                     
  Fly  2296 -SYLRAARATSTQEP--------QPTAG------------------------------------- 2314

  Fly  1148 NNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCED---- 1208
                                 ::..:|::....||.|..||.....:|.|||.||.|:.|.    
  Fly  2315 ---------------------LSLSELLAMCIDVANGCSYLEDMHFVHRDLACRNCLVTESTGST 2358

  Fly  1209 ---NVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSL 1270
               ..|||.||||||.:|:.|.|:|...|.||::|::.|||.|.:|:|.||||::|::.||:.:|
  Fly  2359 DRRRTVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMSPESLVDGLFTTQSDVWAFGVLCWEILTL 2423

  Fly  1271 AKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEKRFANMLGE 1335
            .:.||...: |.|:...:.:|.|:::|....::||.::|.|||.:|..||.|    :|..|.|  
  Fly  2424 GQQPYAARN-NFEVLAHVKEGGRLQQPPMCTEKLYSLLLLCWRTDPWERPSF----RRCYNTL-- 2481

  Fly  1336 DVASHYL--DLNNPYMQS 1351
                |.:  ||....|.|
  Fly  2482 ----HAISTDLRRTQMAS 2495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG_like 346..432 CDD:214653 20/124 (16%)
Ig strand C 363..366 CDD:409353 0/16 (0%)
Ig strand E 396..400 CDD:409353 0/3 (0%)
Ig strand F 410..415 CDD:409353 0/4 (0%)
Ig strand G 425..428 CDD:409353 1/2 (50%)
Ig 458..533 CDD:472250 12/87 (14%)
Ig strand B 459..463 CDD:409353 1/3 (33%)
Ig strand C 472..476 CDD:409353 0/3 (0%)
Ig strand E 497..503 CDD:409353 1/5 (20%)
Ig strand F 513..518 CDD:409353 0/6 (0%)
Ig 671..>742 CDD:472250 15/90 (17%)
Ig strand B 674..678 CDD:409353 0/3 (0%)
Ig strand C 687..691 CDD:409353 2/11 (18%)
Ig strand E 717..721 CDD:409353 0/3 (0%)
Ig strand F 731..736 CDD:409353 3/16 (19%)
Ig 779..851 CDD:472250 17/88 (19%)
Ig strand B 781..785 CDD:409570 2/3 (67%)
Ig strand C 794..798 CDD:409570 0/3 (0%)
Ig strand E 816..821 CDD:409570 3/12 (25%)
Ig strand F 831..836 CDD:409570 1/4 (25%)
Ig strand G 844..847 CDD:409570 0/2 (0%)
Protein Kinases, catalytic domain 927..1332 CDD:473864 109/424 (26%)
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495 18/98 (18%)
fn3 1800..1891 CDD:394996 22/90 (24%)
FN3 1993..2111 CDD:238020 25/128 (20%)
PTKc_c-ros 2213..2483 CDD:270640 105/408 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.