DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvr and sev

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster


Alignment Length:1643 Identity:328/1643 - (19%)
Similarity:550/1643 - (33%) Gaps:584/1643 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILLPLLLILRISWSD--------AVPLQQFS-PDPDDSIENCGGENGAPLMTPCKSAIILDAQ-- 61
            :|.||..:|.:..|.        |.||.... |.||.:             :|..:..:||.|  
  Fly  1138 LLRPLGALLWLERSGRRARLVRLAAPLDVMELPTPDQA-------------SPASALQLLDPQPL 1189

  Fly    62 --------TSTTLKCE--------DDEPMSWWTSQSQYVHVKSFDNTEDPARPFGTSLHLIEVTA 110
                    ..|.|...        ||..:.|..|.|...|..|:....:    ||..|..::::.
  Fly  1190 PPRDEGVIPMTVLPDSVRLDDGHWDDFHVRWQPSTSGGNHSVSYRLLLE----FGQRLQTLDLST 1250

  Fly   111 DYVAAYYCVKTSKFSQIAKEE--------------QSDEAMIELVNQGYASSIYVYVNDPDTKLV 161
            .:         ::.:|:.:.:              ..|...::|.....|.|      .|....|
  Fly  1251 PF---------ARLTQLPQAQLQLKISITPRTAWRSGDTTRVQLTTPPVAPS------QPRRLRV 1300

  Fly   162 DSHNVVTARQYTDVVIPCKPAMPDTEVLLETSNGEMHSSKSVGRYDPQRGFTIEIR---SIVDGG 223
            ....:.||.|..:|....:...|:..........|.|.|..||....:     |:|   |.::..
  Fly  1301 FVERLATALQEANVSAVLRWDAPEQGQEAPMQALEYHISCWVGSELHE-----ELRLNQSALEAR 1360

  Fly   224 DYYCRPNPPFPHNEEEMTSIEVRFIATG--------------------------------LDIPR 256
            ..:.:|:..: |.:     :|.|..|||                                ||:..
  Fly  1361 VEHLQPDQTY-HFQ-----VEARVAATGAAAGAASHALHVAPEVQAVPRVLYANAEFIGELDLDT 1419

  Fly   257 TQTTNMVYTYAP-----GVTDGDDEVLTVTNQSTGNLALIRGGDGTLSRERARRSPARLAPMNAS 316
            .....:|:|.:|     |: :|:..:|.| |:....|..:.|.           :||:||.|.|.
  Fly  1420 RNRRRLVHTASPVEHLVGI-EGEQRLLWV-NEHVELLTHVPGS-----------APAKLARMRAE 1471

  Fly   317 PSPRPGQDGKPLPKPVIRSSVE--HHVFTDTNFTLDCEQSAYVESVYGME--------------W 365
                           |:..:|:  ..:...........|:|.   :|.::              |
  Fly  1472 ---------------VLALAVDWIQRIVYWAELDATAPQAAI---IYRLDLCNFEGKILQGERVW 1518

  Fly   366 FTP-----------SRDENRIFASQSRTDPKT-----RNSTHQTGRSTLTV-----LNAQPSDTG 409
            .||           .:.::.|:....:..|:.     ||.|..:.....||     |:|...:.|
  Fly  1519 STPRGRLLKDLVALPQAQSLIWLEYEQGSPRNGSLRGRNLTDGSELEWATVQPLIRLHAGSLEPG 1583

  Fly   410 LYKCVTTDNSNQ----NVQRATYRIKVLKQNESYL-------NVGEPSGH------YNVQEYANR 457
            .......||..:    :|.|.......|:...:.|       .:.:.||:      ::::.|..|
  Fly  1584 SETLNLVDNQGKLCVYDVARQLCTASALRAQLNLLGEDSIAGQLAQDSGYLYAVKNWSIRAYGRR 1648

  Fly   458 TIQMTANFEGFPTPSFSWFKPDGTEVRQSEN-------NFKILSTELSTMLQVLNAQLQDSGTY- 514
            ..|:....|         .:|:...:.|:.|       |..:|.:...::|:..:.:.|....: 
  Fly  1649 RQQLEYTVE---------LEPEEVRLLQAHNYQAYPPKNCLLLPSSGGSLLKATDCEEQRCLLHL 1704

  Fly   515 -VLRGSNSFGV----VQREYNVSVMDAPALKMSDAYVQ------VGSVARLECT-----VRSYPP 563
             ::..|....:    |:.:.|:::...|..:..|..::      :|:...|..|     .|....
  Fly  1705 PMITASEDCPLPIPGVRYQLNLTLAKEPGSEEHDHGMEPLGQWLLGAGESLNLTDLLPFTRYRVS 1769

  Fly   564 AIVTFFFRPCSLEPQWPTCSVLNQNFSLP----SEQEKYQFQTRPRPGK-LSVE----RIYEVSF 619
            .|::.|::               :..:||    :..|.......|.|.: .||.    |..|||:
  Fly  1770 GILSSFYQ---------------KKLALPTLVLAPLELLTASATPSPPRNFSVRVLSPRELEVSW 1819

  Fly   620 LP-----TEPGILTCIAQNIIDGK-----------ERRTLTK-AHVLLG---------------- 651
            ||     :|....|...|..:||:           |||..|. .|.|.|                
  Fly  1820 LPPEQLRSESVYYTLHWQQELDGENVQDRREWEAHERRLETAGTHRLTGIKPGSGYSLWVQAHAT 1884

  Fly   652 ----NISENMTIYGFDKDHKIAKEDNVNFTCEALAYHFDG--------NLKWFINGEDLKESDSV 704
                |.||.:.:..|   .::.:...:.....:|:..:.|        .|:...:.|.|:.    
  Fly  1885 PTKSNSSERLHVRSF---AELPELQLLELGPYSLSLTWAGTPDPLGSLQLECRSSAEQLRR---- 1942

  Fly   705 HIETSHTKYSYKSTVHITTISDRDRGTYECR------------AYHNDKDAVYSSREIDLYVHDP 757
            ::..:|||      :.:..:..|.|  |:||            .||...: ||.:  :......|
  Fly  1943 NVAGNHTK------MVVEPLQPRTR--YQCRLLLGYAATPGAPLYHGTAE-VYET--LGDAPSQP 1996

  Fly   758 SAPQ------------WT----NGGQ---------EGHSKIKRKLSQ-------TLELECASTAV 790
            ..||            ||    ||..         :..|.|:|:..:       :|| :......
  Fly  1997 GKPQLEHIAEEVFRVTWTAARGNGAPIALYNLEALQARSDIRRRRRRRRRNSGGSLE-QLPWAEE 2060

  Fly   791 PVAIVRWFKDDKEVTESKLRHIIEK--ESKLL--------ITHLYPGDEGVYKCVVENRLDRIER 845
            ||.:...:.|....||  |..|::.  .|:||        :.|.:    |.|    ....:|:..
  Fly  2061 PVVVEDQWLDFCNTTE--LSCIVKSLHSSRLLLFRVRARSLEHGW----GPY----SEESERVAE 2115

  Fly   846 SFTVVISDLPGISMAWVWFGVILFLI----LIGLCVFLAVRYQKEHKRHLALKAAGLANFEEGAV 906
            .|  |..:..|        .::|.:|    ::..||...|..:|..||.|..|.         .:
  Fly  2116 PF--VSPEKRG--------SLVLAIIAPAAIVSSCVLALVLVRKVQKRRLRAKK---------LL 2161

  Fly   907 GHINPDL-----TLDEQAELLPY-NREFE----------FPREN---LKLGKQLGAGAFGVVLKG 952
            ....|.:     ||..|.:|:.. ||.|.          .|:.|   |||.:.||:||||.|.:|
  Fly  2162 QQSRPSIWSNLSTLQTQQQLMAVRNRAFSTTLSDADIALLPQINWSQLKLLRFLGSGAFGEVYEG 2226

  Fly   953 EAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMV 1017
            :.|....||| ..||:|.::..|..  ...|:.|.::|.:. :|.|:|.|:|.            
  Fly  2227 QLKTEDSEEP-QRVAIKSLRKGASE--FAELLQEAQLMSNF-KHENIVCLVGI------------ 2275

  Fly  1018 IVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPI 1082
                               ||      ||:.|  |::.:.|          ..|.|.        
  Fly  2276 -------------------CF------DTESI--SLIMEHM----------EAGDLL-------- 2295

  Fly  1083 HSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDDQIMS 1147
             ||:......:||.|        .|.:|                                     
  Fly  2296 -SYLRAARATSTQEP--------QPTAG------------------------------------- 2314

  Fly  1148 NNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCED---- 1208
                                 ::..:|::....||.|..||.....:|.|||.||.|:.|.    
  Fly  2315 ---------------------LSLSELLAMCIDVANGCSYLEDMHFVHRDLACRNCLVTESTGST 2358

  Fly  1209 ---NVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSL 1270
               ..|||.||||||.:|:.|.|:|...|.||::|::.|||.|.:|:|.||||::|::.||:.:|
  Fly  2359 DRRRTVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMSPESLVDGLFTTQSDVWAFGVLCWEILTL 2423

  Fly  1271 AKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEKRFANMLGE 1335
            .:.||...: |.|:...:.:|.|:::|....::||.::|.|||.:|..||.|    :|..|.|  
  Fly  2424 GQQPYAARN-NFEVLAHVKEGGRLQQPPMCTEKLYSLLLLCWRTDPWERPSF----RRCYNTL-- 2481

  Fly  1336 DVASHYL--DLNNPYMQS 1351
                |.:  ||....|.|
  Fly  2482 ----HAISTDLRRTQMAS 2495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652 20/124 (16%)
Ig <363..432 CDD:299845 17/107 (16%)
Ig 466..533 CDD:299845 11/79 (14%)
IG_like 672..754 CDD:214653 17/101 (17%)
Ig 674..739 CDD:143165 14/84 (17%)
IGc2 779..840 CDD:197706 15/77 (19%)
PKc_like 927..1332 CDD:304357 109/424 (26%)
Pkinase_Tyr 935..1329 CDD:285015 105/400 (26%)
sevNP_511114.2 fn3 439..520 CDD:278470
FN3 826..921 CDD:238020
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495 18/98 (18%)
FN3 1799..1897 CDD:238020 25/97 (26%)
FN3 1993..2111 CDD:238020 25/128 (20%)
Pkinase_Tyr 2209..2481 CDD:285015 107/404 (26%)
PTKc_c-ros 2213..2483 CDD:270640 105/408 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455268
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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