Sequence 1: | NP_001162911.1 | Gene: | Pvr / 34127 | FlyBaseID: | FBgn0032006 | Length: | 1577 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_113713.1 | Gene: | Pdgfrb / 24629 | RGDID: | 3285 | Length: | 1097 | Species: | Rattus norvegicus |
Alignment Length: | 1478 | Identity: | 346/1478 - (23%) |
---|---|---|---|
Similarity: | 548/1478 - (37%) | Gaps: | 488/1478 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 LMTPCKSAIILDAQTSTTLKCEDDEPMSWWTSQSQYVHVKSFDNTEDPARPFGTSLHLIEVTADY 112
Fly 113 VAAYYCVKTSKFSQIAKEEQSDEAMIELVNQGYASSIYVYVNDPDTKL--VDSHNV-VTARQYTD 174
Fly 175 VVIPCKPAMPDTEVLLETSNGE--MHSSKSVGRYDPQRGF--TIEIRSIVDGGDYYCRPNPPFPH 235
Fly 236 NEEEMTSIEVRFIATGLDIPRTQTTNMVYTYAPGVTDGDDEVLTVTNQSTGNLALIRGGDGTLSR 300
Fly 301 ERARRSPARLAPMNASPSPRPGQDGKPLPKPVIRSSVEHHVFTDTNFTLDCEQSAYVESVYGMEW 365
Fly 366 FTPSRDENR--------IFASQSRTDPKTRNSTHQTGRSTLTVLNAQPSDTGLYKCVTTDNSNQN 422
Fly 423 VQRATYRIKVLKQNESYLNVGEPSGHYNVQE-YANRTIQMTANFEGFPTPSFSWFKPDGT----- 481
Fly 482 --EVRQSENNFKILSTELSTMLQVLNAQLQDSGTYVLRGSNSFGVVQREYNVSV-MDAPALKMSD 543
Fly 544 AYVQVGSVARLECTVRSYPPAIVTFFFRPCSLEPQWPTCSVLNQNFSLPSEQEKYQFQTRPRPGK 608
Fly 609 LSVERIYEVSFLPTEPGILTCIAQNIIDGKERRTLTKAHVLLGNISENMTIYGFDKDHKIAKEDN 673
Fly 674 VNFTCEALAYHFDGNLKWFINGEDLKESDSVHIETSHTKYSYKSTVHITTISDRDRGTYECRAYH 738
Fly 739 NDKDAVYSSREIDLYVHDPSAPQWTNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRWFKDDKE 803
Fly 804 VTESKLRHIIEKESKLLITHLYPGDEGVYKCVVENRLDRIERSFTVVISDLPGISMAWVWFGVIL 868
Fly 869 FLILIGLCV-------FLAVRYQKEHKRHLALKAAGLANFEEGAVGHINPDLTLDEQAELLPYNR 926
Fly 927 EFEFPRENLKLGKQLGAGAFGVVLKGEAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMV 991
Fly 992 HLGQHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQ 1056
Fly 1057 RMSDNYELHRDTNGGGLKYAN---VGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGS 1118
Fly 1119 GTATYSYDRQMDTCATVMTTVP-------------EDDQIMS--NNSVQPAWRSNYK-TDSTEAM 1167
Fly 1168 TVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCEDNVVKICDFGLARSMYRGDNYKKSE 1232
Fly 1233 NGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKP 1297
Fly 1298 KFANQELYEIMLECWRKNPESRPLFAELEKRFANMLGEDVASHYLDLNNPYMQSNIEYMKKQSTD 1362
Fly 1363 YLALMGSPDEL----APAAPRYVNGHIVPDIRIEELPDDYMEMSRDSDPDACTAIFSPTRLEGE- 1422
Fly 1423 ---SSDFPDFSSETTFNF---------PGARQSPTLSNNLNSGSSKPL 1458 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pvr | NP_001162911.1 | IG | 346..432 | CDD:214652 | 18/93 (19%) |
Ig | <363..432 | CDD:299845 | 15/76 (20%) | ||
Ig | 466..533 | CDD:299845 | 19/73 (26%) | ||
IG_like | 672..754 | CDD:214653 | 6/81 (7%) | ||
Ig | 674..739 | CDD:143165 | 5/64 (8%) | ||
IGc2 | 779..840 | CDD:197706 | 10/60 (17%) | ||
PKc_like | 927..1332 | CDD:304357 | 158/423 (37%) | ||
Pkinase_Tyr | 935..1329 | CDD:285015 | 155/412 (38%) | ||
Pdgfrb | NP_113713.1 | ig | 36..113 | CDD:395002 | 18/80 (23%) |
Ig strand B | 49..53 | CDD:409353 | 1/3 (33%) | ||
Ig strand C | 59..62 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 82..86 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 96..101 | CDD:409353 | 2/4 (50%) | ||
Ig | 211..309 | CDD:416386 | 22/168 (13%) | ||
Ig strand A | 211..215 | CDD:409353 | 0/3 (0%) | ||
Ig strand A' | 222..226 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 228..237 | CDD:409353 | 2/60 (3%) | ||
Ig strand C | 242..247 | CDD:409353 | 0/4 (0%) | ||
Ig strand C' | 250..252 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 256..264 | CDD:409353 | 0/7 (0%) | ||
Ig strand E | 270..277 | CDD:409353 | 3/18 (17%) | ||
Ig strand F | 287..293 | CDD:409353 | 2/5 (40%) | ||
Ig strand G | 298..304 | CDD:409353 | 0/5 (0%) | ||
Ig | 313..414 | CDD:416386 | 27/104 (26%) | ||
PKc_like | 561..952 | CDD:419665 | 162/453 (36%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1016..1097 | 19/78 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D126783at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_106773 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |