DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvr and Styk1

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_766479.1 Gene:Styk1 / 243659 MGIID:2141396 Length:429 Species:Mus musculus


Alignment Length:568 Identity:120/568 - (21%)
Similarity:217/568 - (38%) Gaps:176/568 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   827 GDEG-----VYKCVVENRLDRI-ERSFTVVISDLPGISMAWVWFGVILFLILIGLCVFLAVRYQK 885
            |::|     :.:|.:.::|..: |:.:.|:|  :|.:.:..       ||||:.:.::|.:|.|:
Mouse     2 GEKGHLSRVLLECSLSDKLCVVREKQYEVII--VPALLVGG-------FLILLAIILWLFIRGQR 57

  Fly   886 EHK-----RHLALKAAGLANFEEGAVGHINPDLTLDEQAELLPYNR---------------EFEF 930
            ..:     |..|...|.....:| |.||        .:..|||...               :.:.
Mouse    58 SQRQSPGPRGTASVPASRGRSQE-AAGH--------GEKVLLPLKETSVEGFLRAATPRLAKLQV 113

  Fly   931 PREN-LKLGKQLGAGAFGVVLKGEAKGIRREEP-TTTVAVKMVKATADNEVVRALVSELKIMVHL 993
            |||. |::.:|:.:|:.|.:.  .|....::.| ..:|.:|.::.....:.|:..:..::...:|
Mouse   114 PREQLLEVLEQIHSGSCGTLY--HATMTTKDHPKPKSVVLKALEDPVGLQEVQDFIGRIQFYQYL 176

  Fly   994 GQHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRM 1058
            |:|.|:|.|.|..|:.:   .|.:::|....|::.:||...|:               .:||.  
Mouse   177 GKHKNLVQLEGCCTERL---PLYMMLEDVVPGDLLSFLWTCRR---------------DVMTM-- 221

  Fly  1059 SDNYELHRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATY 1123
                        .||.|                                                
Mouse   222 ------------DGLLY------------------------------------------------ 226

  Fly  1124 SYDRQMDTCATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYL 1188
                                                  |.||.      .:.....|:...:::|
Mouse   227 --------------------------------------DLTEK------QIYHIGKQILLALEFL 247

  Fly  1189 SSKKVLHGDLAARNILLCEDNVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFST 1253
            ..|.:.|||:||||||:..|...|:|..|||..::.......:.:..:|:||||.|.|.....|.
Mouse   248 QEKHLFHGDVAARNILIQSDLTPKLCHLGLAYEVHAHGAISSARSSTIPLKWLAPERLLLRPASI 312

  Fly  1254 YSDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPES 1318
            ..|:||:||:|:||.:|...|||.:.|. .:...|.....|::|...:..:|.||..|||.:.:|
Mouse   313 RGDIWSFGILLYEMVTLGAPPYPEVPPT-SILQYLQRKKIMKRPSSCSHAMYNIMKCCWRWSEDS 376

  Fly  1319 RPLFAELEKRF--ANMLGEDVASHYL-DLNNPYMQSNIEYMKKQSTDY 1363
            |||..:|.:|.  |:...:|.|...: :|..|.:.:::..::.:|..|
Mouse   377 RPLLGQLLQRLEAASRSADDKAVLQVPELVVPELYADVAGIRAESISY 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845
IG_like 672..754 CDD:214653
Ig 674..739 CDD:143165
IGc2 779..840 CDD:197706 3/17 (18%)
PKc_like 927..1332 CDD:304357 89/408 (22%)
Pkinase_Tyr 935..1329 CDD:285015 84/394 (21%)
Styk1NP_766479.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..83 5/25 (20%)
PKc_like 123..388 CDD:389743 84/391 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.