DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and ver-4

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_509835.2 Gene:ver-4 / 186632 WormBaseID:WBGene00006897 Length:1216 Species:Caenorhabditis elegans


Alignment Length:1375 Identity:316/1375 - (22%)
Similarity:545/1375 - (39%) Gaps:380/1375 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 AYYCVKTSKFSQIAKEEQSDEAMIELVNQGYASSIYVYVNDPDTKLVDSHNVVTARQYTDVVIPC 179
            :||||          .::..|:|::       ::::::|...|. .|....:......::::|||
 Worm   104 SYYCV----------SDEFKESMLQ-------NTVHIFVRKLDI-FVPLKTIYHEHNGSEIIIPC 150

  Fly   180 KPAMPDTEVLLETSNGEMHSSK-----SVGRYDPQRGF-------TIEIRSIV--------DGG- 223
            |     |...::|.|.|::.::     ::..||.:.||       |::..|.|        |.. 
 Worm   151 K-----TTKFVDTKNVELYVNQVKLNSALQGYDQRYGFKLTKNMYTMKPNSTVFFECKYTNDSNQ 210

  Fly   224 --DYYCRPNPPFPHNEEEMTSIEVRFI--ATGLDIP-----RTQTTNMVYTYAPGVTDGDDEVLT 279
              |||...:.|      :.|.|:..|.  ....|:|     .:.|.::||.       |.|.:..
 Worm   211 DLDYYISNSDP------DATLIDQYFFYWEKSNDVPYVGNNYSITCHLVYI-------GSDSLRP 262

  Fly   280 VTNQSTGNLALIRGGDGTLSRERARRSPARLAPMNASPSPRPGQDGKPLPKPVIRSSVEHHVFTD 344
            :.:|..                      ....|.|........|....:.|   |||        
 Worm   263 LNHQEI----------------------VLECPQNQCDGGYNNQSAHEIEK---RSS-------- 294

  Fly   345 TNFTLDCEQSAYVESVYGMEWFTPSRDENRIFASQSRTDPKT-----RNSTH--QTGRSTLTVLN 402
                             |:.:..||        ||...:..|     |.|.:  :|.| |:...|
 Worm   295 -----------------GLRFGDPS--------SQDIVEKNTMLRYDRLSVYDRKTSR-TVNFQN 333

  Fly   403 AQPSDTGLYKCVTTDNSNQNV---------QRATYRIKVLKQNESYLNVGEPSGHYNVQEYANRT 458
            ....|:|:|:|...:.|..|:         |:.| :||:::.::..|.:.:           |.:
 Worm   334 LTSEDSGIYRCTWRNRSKTNIVLDYDLNFNQKGT-QIKIIETSKQRLKMRK-----------NES 386

  Fly   459 IQMTANFEGFP----TPSFSWFK------PDGTEVRQSENN-FKILSTELS---TMLQVLN---A 506
            ..:...|..||    ..:..|.:      ..|.:|....|. |:.::|:.|   ..|:.||   .
 Worm   387 TLLFVKFAVFPINKKNYTAKWSRLYNSTVEGGQQVETIRNGFFRQITTKTSGRNVFLETLNLKSP 451

  Fly   507 QLQDSGTYVLRGSNSFGVVQR----------EYN--VSVMDAPALKMSD-AYVQVGSVARLECTV 558
            :::.||.|||..|| ..:||:          |.|  :::.|...|.:|: .::.:.:...:.|..
 Worm   452 KIEMSGIYVLSISN-MDIVQQVKWIIEVENDEPNAQLTIRDPLTLNISNQLFLPLNTNLSIFCLA 515

  Fly   559 RSYPPAIVTFFFRPCSLEPQWPTCSVLNQNFSLPSEQEKYQ--FQTRPRPGKLSVERIYEVSFLP 621
            .|..|..|.|.:|                    ..|.|.::  ::.:.|....:.|:.:..:|:.
 Worm   516 VSSSPTDVIFEYR--------------------TDENEWFRGFYKNKLRKIDDTFEKGFIYNFVL 560

  Fly   622 TEPGILTCIAQNIIDGKERRTLTKAHVLLGNISENMTIYGFDKDHKIAKE---------DNVNFT 677
            .:.....||  |:   |:::|.||...:..|  .|.|.:..:|.....|.         |||..|
 Worm   561 AKRTDFKCI--NV---KKKKTSTKFITVTSN--ANKTFHEIEKSVNATKTEPSDIIFEGDNVRLT 618

  Fly   678 CEAL--AYHFDGNLKW-FINGEDLKES--DSVHIETSHTKYSYKSTV-HITTISDRDRGTYECRA 736
            |...  |..||  :.| |.|.:.||.:  .::|    ..|..||..: ::..|:....|||.|..
 Worm   619 CVVPYGAVEFD--VFWKFENPKMLKYTTFPAMH----PVKDRYKRVILNVRNITIDFTGTYYCIV 677

  Fly   737 YHNDKDAVYSSR-EIDLYVHDPSAPQWTNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRWFKD 800
                |:..:..| |..:.|...|.|...|  ....|.|.....|..::.|....||.....||||
 Worm   678 ----KNKEFEHRFETSISVEKVSPPFLLN--NNSRSIISASNGQMFDINCKVNGVPTPDYTWFKD 736

  Fly   801 DKEVTESKL----RHIIEKESKLLITHLYPGDEGVYKCVVENR----LDRIERSFTVVISDLPGI 857
            ....|:.|:    .|:.:.|.:         |.|::.|...||    :|.||    |.::.....
 Worm   737 GYPYTKGKVIGNALHVSKAEKR---------DNGIFWCSATNRAGTTIDYIE----VKVAGASSS 788

  Fly   858 SMAWVWFGVILFLILIGLCVFLAVRY--QKEHK-RHLALKAAGLA--NFEEGAVGHINPDLTLDE 917
            |..|::.....| :::|:.|.|..:.  ||:.| ..|:|.....|  .:::..|.....:|.::|
 Worm   789 SFFWLFITFFAF-VVVGIVVSLLWKLFGQKDLKPSELSLNNLKRATDEYQKYTVSEKINNLPVEE 852

  Fly   918 QAELLPYNREFEFPRENLKLGKQLGAGAFGVVLKGEAKGIRRE----EPTTTVAVKMVKATADNE 978
            :.:.|.||.::|...|||::.:.||:|.||:|.||.......:    |...:||:|....:::.|
 Worm   853 RIDYLTYNEDYEIDLENLEILETLGSGQFGIVKKGYLNMASSKNFGFESRLSVAIKSSTDSSNME 917

  Fly   979 VVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFINQIN 1043
            :.:....|||:|..:.:|.||::|:||||||:...||.::.|....||::.||...|..|.|:: 
 Worm   918 LQKMFFEELKLMCAIPKHPNVLSLVGAVTKNMEIGELFIVTELIDGGNLREFLRERRDVFANEL- 981

  Fly  1044 PDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPR 1108
                                    ...|.:...||                        .:|.|:
 Worm   982 ------------------------VEKGYIFLTNV------------------------RENVPK 998

  Fly  1109 SGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVD 1173
                              |::           |.:|::.:                |..::.|.|
 Worm   999 ------------------REV-----------EKEQLLID----------------EFNSLCTSD 1018

  Fly  1174 LISWAFQVARGMDYLSSKKVLHGDLAARNILLCEDNVVKICDFGLA-----RSMYRGDNYKKSEN 1233
            |:|...|:|.|||:|::...:|.|||.||:|:.:..:::|.|||||     ::.||   .::|.:
 Worm  1019 LLSIGLQIANGMDWLANIPCVHRDLACRNVLISKTKIIRIADFGLAKKHTDKAYYR---VRESLD 1080

  Fly  1234 GKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKPK 1298
            ..||::|:.|||::|..|:..||||||||.|:|:|:|...|||.. ||..|...:..|...::|.
 Worm  1081 TPLPVRWMPLESITDLTFTQKSDVWSYGICLYEIFTLGGTPYPDC-PNFSLVEYIKTGNINKRPS 1144

  Fly  1299 FANQELYEIMLECWRKNPESRPLFAELEKRFANMLGEDVASHYLDLNNPYMQSNIEYMKKQSTDY 1363
            ..::::|:||..||:.:|:.||.|||..|.|.|.: :..||..|.    .::.::|..|.....:
 Worm  1145 NCHKDVYKIMKMCWQASPDDRPTFAECIKLFKNHI-QYFASKLLQ----QIEKDLECEKNNQQKF 1204

  Fly  1364 LALMGSPDEL 1373
            ...:..|.:|
 Worm  1205 HYWVQKPTQL 1214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652 21/101 (21%)
Ig <363..432 CDD:299845 20/84 (24%)
Ig 466..533 CDD:299845 23/95 (24%)
IG_like 672..754 CDD:214653 25/88 (28%)
Ig 674..739 CDD:143165 20/70 (29%)
IGc2 779..840 CDD:197706 17/68 (25%)
PKc_like 927..1332 CDD:304357 117/413 (28%)
Pkinase_Tyr 935..1329 CDD:285015 113/402 (28%)
ver-4NP_509835.2 ig 609..679 CDD:278476 22/79 (28%)
IG_like 611..692 CDD:214653 25/90 (28%)
IG_like 709..782 CDD:214653 22/85 (26%)
IGc2 714..772 CDD:197706 17/66 (26%)
STYKc 870..1175 CDD:214568 113/402 (28%)
PTKc 874..1176 CDD:270623 112/399 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 287 1.000 Inparanoid score I1712
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D126783at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X787
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.970

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