DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvr and ver-3

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_509836.1 Gene:ver-3 / 181289 WormBaseID:WBGene00006896 Length:1227 Species:Caenorhabditis elegans


Alignment Length:1517 Identity:341/1517 - (22%)
Similarity:572/1517 - (37%) Gaps:423/1517 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RLILLPLLLILRISWS---DAVPLQQFSPDPDDSIENCGGENGAPLMTPCKSAIILDAQTSTTLK 67
            :|.|..||:::..|.|   .|:.::.:.....|||               ...:.|:..|...||
 Worm     2 KLKLTVLLILVHASASYKPPAIEVEDYQVQEHDSI---------------GKFVELEEHTRLILK 51

  Fly    68 CE---------DDEPMSWWTSQSQYVHVKSFDNTEDPARPFGTS-LHLIEVTADYVAAYYCVKTS 122
            |.         :...|.......:....|..:...|.|  ||.. |.|.:|.......|.|    
 Worm    52 CSAHHNGDLKYNFPSMEGNVGYDENNFKKRMEEYYDDA--FGDKVLTLNDVRESDTGTYSC---- 110

  Fly   123 KFSQIAKEEQSDEAMIELVNQGYASSIYVYVNDPDTKLVDSHNVVTARQYTDVVIPCKPAMPDTE 187
              |.:.....:|             :|||:|:.... .:...:|:...:..:|::|||     |.
 Worm   111 --SSMEHSSLND-------------TIYVFVHRKKV-FLPLKSVMIIYKQGEVMVPCK-----TT 154

  Fly   188 VLLETSNGEMHSSK------SVGRYDPQRGFTI-----EIRSIVDGGDYYCRPNPPFPHNEEEMT 241
            ..::.|:.|:::|.      |...||.:.||.|     ..:.||| .::.||      :.:||  
 Worm   155 KFVDKSDIELYASNVLVKEASKYNYDQRYGFKITKKLYSEKQIVD-VNFECR------YKKEE-- 210

  Fly   242 SIEVRFIATGLDIPRTQTTNMVYTYAPGVTDGDDEVLTVTNQSTGNLALIRGGDG-TLSRERARR 305
                           .||...:.|.....:|                      || ..|.|:..:
 Worm   211 ---------------NQTATYIITEKEASSD----------------------DGYHFSWEKGFQ 238

  Fly   306 SPARLAPMNASPSPRPGQDGKPLPKPVIRSSVEHHVFTDTNFTLDCEQSAYVESVYGMEWFTPSR 370
            .|.  ...|.|.:.....:|..:          .|.:|: ..:::|.|.::          .|..
 Worm   239 WPH--VGYNFSLTCNLNYNGSKI----------FHGYTN-KLSIECPQCSH----------DPGS 280

  Fly   371 ----DENRIFASQSRTDPKTRNSTHQTGRSTLTVLNAQPSDTGLYKCVTTDNSNQNVQRATY--- 428
                |.:||..::..|              |:.:.:.:..|:|.|.|: .::.|:..:...|   
 Worm   281 HVHVDRHRIIGNKIST--------------TVRIQHLELEDSGKYTCI-WEHENKETKYTDYHLY 330

  Fly   429 ------RIKVLKQNESYLNVGEPSGHYNVQEYANRTIQMTANFEGFPTPSFS----WFKPDGTEV 483
                  :|||::.:.:.:.:.|           ||...:||.|..:|....|    |.:...:.:
 Worm   331 VAPKKAQIKVIETSPTIMRIKE-----------NRATSLTAKFAIYPFEKESYTAKWSRIYNSSI 384

  Fly   484 RQSENNFKILSTELSTM---------------LQVLNAQLQDSGTYVLRGSNSFGVVQREYNVSV 533
            .:...:..|::.:...:               ::........||||||..|:...|...::.|::
 Worm   385 HEGPQSETIINDDFRKIAATSFGDGAFSENLDIKAFAVSTNMSGTYVLSISHMDTVQVVQWEVAI 449

  Fly   534 -MDAPALKM-----------SDAYVQVGSVARLECTVRSYPPAIVTFFFRPCSLEPQWPTCSVLN 586
             .|.|.:::           :..|.:..:...:||...|.|||.|.|.::..:.|          
 Worm   450 ENDEPDVQITVREPSSFFISNQEYYKPDTNLHIECISISIPPADVVFEYKTKNSE---------- 504

  Fly   587 QNFSLPSEQEKYQFQTRPRPGKL-----SVER--IYEVSFLPTEPGILTCIAQNIIDGKERRTLT 644
                        ||| ...|.||     :.:|  ||.|:|  ||...|.|  .:|..|....|:.
 Worm   505 ------------QFQ-EIEPNKLVSVGGTFDRGLIYNVTF--TEGMDLKC--SSIRKGNRAITVN 552

  Fly   645 KAHVLLGNISENMTIYGFD-KDH-------------KIAKE-DNVNFTCEALAYHFDGNLKWFIN 694
            |    |..|.|     ||: :.|             ||..| |||..||.......|.::.|  .
 Worm   553 K----LIKIGE-----GFEVRPHHEKSSKATESEPSKIIYEGDNVKLTCVFPLDSDDWSVSW--R 606

  Fly   695 GEDLKESDSVHI----ETSHTKYSYKSTVHITTISDRDRGTYECRAYHNDKDAVYSSREIDLYVH 755
            .|:.|.||...|    ||...:||....:::..::....|||.|...:.|.:.:.   |..:.|.
 Worm   607 FENSKSSDISSIPTTTETEIKQYSKHLILNLRDVTTSFTGTYTCVVKNEDSEKLL---ETSIDVK 668

  Fly   756 DPSAPQWTNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRWFKDDKEVTESKLRHIIEKESKLL 820
            ..|.|..|.|  ..::.:.....|..|:.|..|..|..:.:||||....|...:     ..|.|.
 Worm   669 AISKPSITGG--NSNAVVIVDYDQYFEINCNMTGTPPPVYQWFKDGNPYTHGDV-----DGSILR 726

  Fly   821 ITHLYPGDEGVYKCVVENRLDRIERSFTVVISDLPGISMAWVWFGVILFLILIGLCVFLAVRYQK 885
            ::.....|:|.:.|:..||......|..|.:::.|..|:.:.||..:|.||.| :.|||.....:
 Worm   727 VSRARGEDDGEFHCLATNRAGDKLNSIEVQVNNAPKGSLFFYWFLALLLLISI-IAVFLLTCKLR 790

  Fly   886 EHKRHLALKAAGLANFEEGAVGH-INP------DLTLDEQAELLPYNREFEFPRENLKLGKQLGA 943
            ...|....|...|....|..:.| ..|      ||.::|:...||||.::|....||::...:|:
 Worm   791 ASNRLTKQKDIALNTLYETMIKHQAGPLPEEMKDLPVEERTYYLPYNNDYEIDPVNLEILNPIGS 855

  Fly   944 GAFGVVLKG-----EAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLL 1003
            |.||||.||     ..|.....:....||||......:.|:.:.:..|||:|..:.::.||:.|:
 Worm   856 GHFGVVKKGLLGMAYPKSKIESKTRLPVAVKSSTNPFNVELQKMMAEELKVMCAIPKNPNVLALI 920

  Fly  1004 GAVTKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDT 1068
            ||||||:.:.:|.::.|:...||::.||..:|..|||::                          
 Worm   921 GAVTKNMRQGQLYIVTEFIDGGNLREFLQAHRNTFINEL-------------------------- 959

  Fly  1069 NGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCA 1133
                             :.:.|                                           
 Worm   960 -----------------VEDEH------------------------------------------- 964

  Fly  1134 TVMTTVPEDDQIMSNNSVQPAWRSNYKTDS----------TEAMTVTTVDLISWAFQVARGMDYL 1188
                 ||.||..:..|||:   :..||.|.          .:...:.|.||:|...|:|:||.:|
 Worm   965 -----VPVDDSYLVPNSVK---KKIYKFDEKLGEGTRLLVEDPDALCTSDLLSIGLQIAKGMAWL 1021

  Fly  1189 SSKKVLHGDLAARNILLCEDNVVKICDFGLARSMYRGDNY--KKSENGKLPIKWLALESLSDHVF 1251
            :....:|.|||.||:|:.:..:|:|.||||::.......|  |||::..||::|:.||.:.:..|
 Worm  1022 ADVPCVHRDLACRNVLITKTKIVRIADFGLSKKHTNKTYYRTKKSKDTPLPVRWMPLECIEEFKF 1086

  Fly  1252 STYSDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNK---LNDGYRMEKPKFANQELYEIMLECWR 1313
            :..|||||:||.|:|:|:|...||    ||.:.||.   :.:|.|.::|::.:.|:||:|..||:
 Worm  1087 TQKSDVWSFGICLYEIFTLGGTPY----PNCDTFNVIEFIRNGNRNKQPEYCHDEIYELMKVCWQ 1147

  Fly  1314 KNPESRPLFAELEKRFANMLGEDVASHYLDLNNPYMQSNIEYMKKQSTDYLALMGSPDELAPAAP 1378
            .||:.||.|.:....|.|.: .|.:|.:|:.....:.:.::...|.. |::. ...||       
 Worm  1148 FNPKDRPTFNDCITFFENHM-RDSSSQFLERVENMLHTEMQEQSKLD-DWIQ-DSRPD------- 1202

  Fly  1379 RYVNGHIVPDIRIEELPDDYME 1400
                   ||::..::.|....|
 Worm  1203 -------VPNVSFQKSPKKQKE 1217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652 15/98 (15%)
Ig <363..432 CDD:299845 13/81 (16%)
Ig 466..533 CDD:299845 13/85 (15%)
IG_like 672..754 CDD:214653 22/85 (26%)
Ig 674..739 CDD:143165 18/68 (26%)
IGc2 779..840 CDD:197706 16/60 (27%)
PKc_like 927..1332 CDD:304357 115/424 (27%)
Pkinase_Tyr 935..1329 CDD:285015 112/413 (27%)
ver-3NP_509836.1 IG 242..>313 CDD:214652 16/105 (15%)
IG_like 578..667 CDD:214653 25/93 (27%)
Ig_3 578..654 CDD:290638 23/77 (30%)
I-set 673..757 CDD:254352 22/90 (24%)
IGc2 692..747 CDD:197706 16/59 (27%)
STYKc 847..1163 CDD:214568 112/413 (27%)
PTKc 851..1164 CDD:270623 111/410 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 287 1.000 Inparanoid score I1712
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D126783at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X787
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.970

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