DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and igcm-4

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_508377.1 Gene:igcm-4 / 180518 WormBaseID:WBGene00022418 Length:541 Species:Caenorhabditis elegans


Alignment Length:230 Identity:52/230 - (22%)
Similarity:88/230 - (38%) Gaps:45/230 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   640 RRTLTKAHVLLGNISENMTIYGFDKDHKIAKEDNVNFTCEALAYHFDGN-LKWFINGEDLKESDS 703
            |...||..:.||                   :......|..:|...|.. ::|..|||.|.....
 Worm    37 RNVETKFRIPLG-------------------QKQFRLVCPIIATEKDSTMIQWSKNGEQLDWDSQ 82

  Fly   704 VHIETSHTKYSYKSTVHITTISDRDRGTYECRA--------------YHNDKDAVYSSREIDLYV 754
            ..:.....:...||      :...|.|.|:|:|              .|:..|...|.::..:..
 Worm    83 YKLSKDSKELKMKS------VKFEDSGRYQCQATNGFGHKTIEFIVHVHDQHDKENSVKDYLVLS 141

  Fly   755 HDPSAPQW-TNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRWFKDDKEVTESKLRHIIEKESK 818
            :..::|.| .:...|..|.||......|||.|.:...|:..:||::::.|::|...:|:    |.
 Worm   142 NTTASPSWLIDMNSEWRSPIKINTGGKLELRCPAQGNPLPEIRWYQNEMEISEKTHKHV----ST 202

  Fly   819 LLITHLYPGDEGVYKCVVENRLDRIERSFTVVISD 853
            :.:..:.....|||:|||||.|..:..:|.|.:.|
 Worm   203 ITVEPVESSHSGVYRCVVENPLGSLSFAFDVSVGD 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845
IG_like 672..754 CDD:214653 18/96 (19%)
Ig 674..739 CDD:143165 15/79 (19%)
IGc2 779..840 CDD:197706 19/60 (32%)
PKc_like 927..1332 CDD:304357
Pkinase_Tyr 935..1329 CDD:285015
igcm-4NP_508377.1 IGc2 52..114 CDD:197706 15/67 (22%)
I-set 159..235 CDD:254352 25/79 (32%)
IGc2 166..225 CDD:197706 19/62 (31%)
IG_like 261..373 CDD:214653
Ig 269..374 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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