DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and kin-30

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_506771.3 Gene:kin-30 / 180032 WormBaseID:WBGene00002211 Length:458 Species:Caenorhabditis elegans


Alignment Length:533 Identity:147/533 - (27%)
Similarity:227/533 - (42%) Gaps:151/533 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   836 VENRLDRIERSFTVVISDLPGISMAWVWFGVILFLILIGLCVFLAVRYQKE-----HKRHLA--- 892
            |||. |..|:...:::.    :..|...:|| |.:|.:.:| ||...|:..     ::|:|.   
 Worm    16 VENH-DESEKPNLIIVF----LMCALFIYGV-LSIIFVTIC-FLRRIYRSSATKNGNRRYLVQNT 73

  Fly   893 -LKAAGLAN-----------FEEGAVGHINPDLT----LDEQAELLPYNREFEFPRENLKL-GKQ 940
             :||....|           .|..::....|.:|    |:|:||.||||..||...|:|.: .||
 Worm    74 YVKAQLDTNSSSSLPVDKEIIETISINEETPIITDYQPLNERAEYLPYNPAFEIHSEHLDVFEKQ 138

  Fly   941 LGAGAFGVVLKGEAKGIRR---EEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNL 1002
            .|.|.||.|.|...|.|.:   |.....||||....:.|....:.::.|:|:|..:|:|.||:.:
 Worm   139 FGQGNFGKVNKALLKLINQKTGEVVRMDVAVKKPADSTDKSQDKLILDEIKLMCAIGKHPNVLAI 203

  Fly  1003 LGAVTKN---IAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYEL 1064
            :||:||.   |.:...:|:.|:...|::::.|         :..|.|.| |....|         
 Worm   204 VGAITKQEKVIGREHNLVVTEFVEGGDLRSVL---------KYTPYTFH-DELTST--------- 249

  Fly  1065 HRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQM 1129
              |..||.:.                           |||                   .:|.  
 Worm   250 --DRTGGQMV---------------------------NSD-------------------IFDE-- 264

  Fly  1130 DTCATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVL 1194
                                                   ::|.||.|:|:|:|.||:||::|..:
 Worm   265 ---------------------------------------LSTSDLYSFAYQIANGMEYLAAKPCV 290

  Fly  1195 HGDLAARNILLCEDNVVKICDFGLARSMYRGDNYKKSEN--GKLPIKWLALESLSDHVFSTYSDV 1257
            |.|||.||:.:..:.:::|.||||||...:...|:...|  ..|||.|||.|..::..|:..:||
 Worm   291 HRDLALRNVFVKRNKMIRIGDFGLARHHSKKSYYRMQCNPDTPLPIFWLAPECFNESKFTEMTDV 355

  Fly  1258 WSYGIVLWEMFSLAKVPYPGI--DPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRP 1320
            ||||:.|:|:|||.:.||..:  .|:.::.:.|..|||:..|::.|.|:||.||.||..:...||
 Worm   356 WSYGVCLFELFSLGESPYKKLHNSPSYDVVHYLKKGYRLSAPRYCNAEIYEFMLYCWNIDATLRP 420

  Fly  1321 LFAELEKRFANML 1333
            .|.|. |.|...|
 Worm   421 KFTEC-KDFCKSL 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845
IG_like 672..754 CDD:214653
Ig 674..739 CDD:143165
IGc2 779..840 CDD:197706 3/3 (100%)
PKc_like 927..1332 CDD:304357 116/415 (28%)
Pkinase_Tyr 935..1329 CDD:285015 112/404 (28%)
kin-30NP_506771.3 TyrKc 134..428 CDD:197581 111/402 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D126783at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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