DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and kin-30

DIOPT Version :10

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_506771.3 Gene:kin-30 / 180032 WormBaseID:WBGene00002211 Length:458 Species:Caenorhabditis elegans


Alignment Length:533 Identity:147/533 - (27%)
Similarity:227/533 - (42%) Gaps:151/533 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   836 VENRLDRIERSFTVVISDLPGISMAWVWFGVILFLILIGLCVFLAVRYQKE-----HKRHLA--- 892
            |||. |..|:...:::.    :..|...:|| |.:|.:.:| ||...|:..     ::|:|.   
 Worm    16 VENH-DESEKPNLIIVF----LMCALFIYGV-LSIIFVTIC-FLRRIYRSSATKNGNRRYLVQNT 73

  Fly   893 -LKAAGLAN-----------FEEGAVGHINPDLT----LDEQAELLPYNREFEFPRENLKL-GKQ 940
             :||....|           .|..::....|.:|    |:|:||.||||..||...|:|.: .||
 Worm    74 YVKAQLDTNSSSSLPVDKEIIETISINEETPIITDYQPLNERAEYLPYNPAFEIHSEHLDVFEKQ 138

  Fly   941 LGAGAFGVVLKGEAKGIRR---EEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNL 1002
            .|.|.||.|.|...|.|.:   |.....||||....:.|....:.::.|:|:|..:|:|.||:.:
 Worm   139 FGQGNFGKVNKALLKLINQKTGEVVRMDVAVKKPADSTDKSQDKLILDEIKLMCAIGKHPNVLAI 203

  Fly  1003 LGAVTKN---IAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYEL 1064
            :||:||.   |.:...:|:.|:...|::::.|         :..|.|.| |....|         
 Worm   204 VGAITKQEKVIGREHNLVVTEFVEGGDLRSVL---------KYTPYTFH-DELTST--------- 249

  Fly  1065 HRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQM 1129
              |..||.:.                           |||                   .:|.  
 Worm   250 --DRTGGQMV---------------------------NSD-------------------IFDE-- 264

  Fly  1130 DTCATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVL 1194
                                                   ::|.||.|:|:|:|.||:||::|..:
 Worm   265 ---------------------------------------LSTSDLYSFAYQIANGMEYLAAKPCV 290

  Fly  1195 HGDLAARNILLCEDNVVKICDFGLARSMYRGDNYKKSEN--GKLPIKWLALESLSDHVFSTYSDV 1257
            |.|||.||:.:..:.:::|.||||||...:...|:...|  ..|||.|||.|..::..|:..:||
 Worm   291 HRDLALRNVFVKRNKMIRIGDFGLARHHSKKSYYRMQCNPDTPLPIFWLAPECFNESKFTEMTDV 355

  Fly  1258 WSYGIVLWEMFSLAKVPYPGI--DPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRP 1320
            ||||:.|:|:|||.:.||..:  .|:.::.:.|..|||:..|::.|.|:||.||.||..:...||
 Worm   356 WSYGVCLFELFSLGESPYKKLHNSPSYDVVHYLKKGYRLSAPRYCNAEIYEFMLYCWNIDATLRP 420

  Fly  1321 LFAELEKRFANML 1333
            .|.|. |.|...|
 Worm   421 KFTEC-KDFCKSL 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG_like 346..432 CDD:214653
Ig strand C 363..366 CDD:409353
Ig strand E 396..400 CDD:409353
Ig strand F 410..415 CDD:409353
Ig strand G 425..428 CDD:409353
Ig 458..533 CDD:472250
Ig strand B 459..463 CDD:409353
Ig strand C 472..476 CDD:409353
Ig strand E 497..503 CDD:409353
Ig strand F 513..518 CDD:409353
Ig 671..>742 CDD:472250
Ig strand B 674..678 CDD:409353
Ig strand C 687..691 CDD:409353
Ig strand E 717..721 CDD:409353
Ig strand F 731..736 CDD:409353
Ig 779..851 CDD:472250 5/14 (36%)
Ig strand B 781..785 CDD:409570
Ig strand C 794..798 CDD:409570
Ig strand E 816..821 CDD:409570
Ig strand F 831..836 CDD:409570 147/533 (28%)
Ig strand G 844..847 CDD:409570 1/2 (50%)
Protein Kinases, catalytic domain 927..1332 CDD:473864 116/415 (28%)
kin-30NP_506771.3 TyrKc 134..428 CDD:197581 111/402 (28%)
Blue background indicates that the domain is not in the aligned region.

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