DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvr and ver-1

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_497162.2 Gene:ver-1 / 175182 WormBaseID:WBGene00006894 Length:1083 Species:Caenorhabditis elegans


Alignment Length:1298 Identity:269/1298 - (20%)
Similarity:481/1298 - (37%) Gaps:402/1298 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 VTADYVAAYYCVKTSKFSQIAKEEQSDEAMIELVNQGYASSIYVYVNDPDTKL-VDSHNVVTARQ 171
            :..|||         :...|.:.:....:.....|...:.||:|:|:  .:|: :.|.:|.:.:.
 Worm   111 LNTDYV---------RIEDIRESDTGSFSCNSTENPAQSDSIHVFVH--KSKIFLPSKSVFSKKD 164

  Fly   172 -YTDVVIPCKPAMPDTEVLLETSNGEMHS-SKSVGR--YDPQRGFTIEIRSIVDGGDYYCRPNPP 232
             :.::.:|||     |..|.|:...|::: .|.|..  :||:.||.|..:.      |..:|   
 Worm   165 LWNELTVPCK-----TTKLTESKEIELYADGKLVASQDFDPRHGFRITRKG------YAAQP--- 215

  Fly   233 FPHNEEEMTSIEVRFIATGLDIPRTQTTNMVYTYAPGVTDGDDEVLTVTNQSTGNLALIRGGDGT 297
                    :..|.:|....    :||:.:.:.:....:   |:|.:..                 
 Worm   216 --------SFFECKFNKKN----KTQSVDFIISKNEPI---DNEYILF----------------- 248

  Fly   298 LSRERARRSPARLAPMNASPSPRPGQDGKPLPKPVIRSSVEHHVFTDTNFTLDCEQSAYVESVYG 362
                                    .:|..|.|          ||  ..||:|.| ...|:|    
 Worm   249 ------------------------WEDSFPFP----------HV--GYNFSLTC-HLVYIE---- 272

  Fly   363 MEWFTPSRDENRIF-------ASQSRTDPK-TRNSTHQTGR----STLTVLNAQPSDTGLYKCV- 414
                 |:.:..::.       ..|||.|.. .....|..||    |.:.:.|.|..|.|.|:|: 
 Worm   273 -----PNGNAPKLGELAFECPQCQSRLDNHLVIEKHHNVGRKRLSSAIHIKNLQLRDAGKYRCIW 332

  Fly   415 -TTDNSNQNVQRATY------RIKVLKQNESYLNVGEPSGHYNVQEYANRTIQMTANFEGFPTPS 472
             .|..:.|.::.:.:      ::::|:|:.|:|.....||          ::::.|.|..:|..:
 Worm   333 KKTGKARQEIEHSLHVSPTIAQVRILEQSPSFLKAKAGSG----------SVKLYAKFAVYPAGN 387

  Fly   473 F--SWFKPDGTEVRQSENNFK---------------ILSTELSTMLQVLNAQLQDSGTYVL---- 516
            :  :|        |::.|:.:               :.::|...:|.:.:.....||.|:|    
 Worm   388 YTVTW--------RRTYNSIEGPRDEIVEKGLSATFLENSESMEVLDITDLSCNKSGKYLLSINY 444

  Fly   517 --RGSNSFG--VVQREY---NVSVMDAPALKM-SDAYVQVGSVARLECTVRSYPPAIVTFFFRPC 573
              .....|.  .|:.:|   .:.:.:..:.|: ...:..:|:...::|...|.|.......:|  
 Worm   445 QDTSETIFWEVAVESDYPDVQLIIREPASFKVFGHQFYLLGTHLNIDCVSTSIPLVDALLEYR-- 507

  Fly   574 SLEPQWPTCSVLNQNFSLPSEQEKYQFQTRPRPGKLSVERIYEVSFLPTEPGILTCIAQNIIDGK 638
                        .:||.:      :...:|......:.||......:.||..:|.|...|     
 Worm   508 ------------KENFKI------FTKVSRSFVADGTFERKISYQVVLTENMMLKCRVGN----- 549

  Fly   639 ERRTLTKAHVL--LGNI-----SENMTIYGFDKDHKIAKEDNVNFTCEALAYHFDGNLKWFINGE 696
             |..|...||.  :.||     |....||         :.|.|..||.........::.|.....
 Worm   550 -RVALETVHVADEIPNIKFKLASNKSAIY---------EGDTVKLTCVVPKLAGRCSITWVHRNL 604

  Fly   697 DLKESDSVHIETSHTKYSYKSTVHITTISDRDRGTYECRAYHNDKDAVYSSREIDLYVHDPSAPQ 761
            .:..|..|   |.|::.|:   ::|...:....|.|.| ...|.....:|...| |.|....||.
 Worm   605 SILHSTEV---TEHSQLSF---LYIRNATTSASGNYTC-VLENQASENFSLSTI-LKVEPIIAPY 661

  Fly   762 WTNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRWFKDDKEV-TESKLRHIIEKESKLLITHLY 825
            ....|....:..|        |:|.....|....:||||.... |..:|:...|..|        
 Worm   662 IVKTGFSAPTGSK--------LDCNIDGRPPPEYQWFKDGTPYGTGRRLKFFEEDNS-------- 710

  Fly   826 PGDEGVYKCVVENRLDRIERSFTVVISDLPGISMAWVWFGVILFLILIGLCVFLA------VRYQ 884
                |:|:|:..||......||     :|.....::..| |:|.::.:|:.|.|.      :.::
 Worm   711 ----GIYQCLATNRAGSATNSF-----ELKTAGRSYGIF-VLLAILALGILVILGWKISTKLGWK 765

  Fly   885 KEHKRHLALKA-AGLANFEEGAVGHINPDLTLDEQAELLPYNREFEFPRENLKLGKQLGAGAFGV 948
            |.....|..|: .|..||........:              |..|||.:::|::.:.:|:|.|||
 Worm   766 KNRDLKLLYKSLIGSENFLPNGKNQFS--------------NFNFEFHKDSLEILEPIGSGHFGV 816

  Fly   949 VLKGEAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKR 1013
            |.:|..||.:     |.||||.....:.....:.:|.|||:|..:.:|.||:.|:||:|||:...
 Worm   817 VRRGILKGTK-----TVVAVKSSSYRSSIGFQKVIVEELKLMSAIPKHPNVLALVGAITKNLRHG 876

  Fly  1014 ELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANV 1078
            ||.:::||...||:::||.:.|..||::::                ||::               
 Worm   877 ELYILMEYIDGGNLRDFLQQRRNVFIDELH----------------DNFD--------------- 910

  Fly  1079 GFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDD 1143
                                     :|.|                                    
 Worm   911 -------------------------ENIP------------------------------------ 914

  Fly  1144 QIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCED 1208
                  .::|.:.|           ::|.||:..|.|:|.||::|.:...:||:|..|.:|:.:.
 Worm   915 ------LIRPDFNS-----------LSTTDLVGIAHQIANGMEWLGNVPCVHGNLCCRKVLISKT 962

  Fly  1209 NVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKV 1273
            ..::|.|:|:      ||..:||.:    ::|:|.|::...:||:.|||||:||.|:|:|:|...
 Worm   963 KTIRITDYGV------GDRQRKSSS----MRWMAPEAIEHQMFSSKSDVWSFGICLYEIFTLGGT 1017

  Fly  1274 PYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLF---AEL-EKRFANM 1332
            |||.. ..:.:...:.:|.|..:|::....||::|..|||..|:.||.|   :|| ||:..::
 Worm  1018 PYPTC-VTENILKHIKNGSRNLQPEYCPSALYDLMQLCWRAPPQDRPKFSLCSELIEKQLKDL 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652 23/105 (22%)
Ig <363..432 CDD:299845 17/88 (19%)
Ig 466..533 CDD:299845 13/94 (14%)
IG_like 672..754 CDD:214653 18/81 (22%)
Ig 674..739 CDD:143165 13/64 (20%)
IGc2 779..840 CDD:197706 15/61 (25%)
PKc_like 927..1332 CDD:304357 106/408 (26%)
Pkinase_Tyr 935..1329 CDD:285015 103/397 (26%)
ver-1NP_497162.2 Ig <294..331 CDD:299845 10/36 (28%)
ig 576..652 CDD:278476 19/92 (21%)
IG_like 578..654 CDD:214653 18/83 (22%)
IG_like 660..731 CDD:214653 21/95 (22%)
IGc2 674..722 CDD:197706 17/67 (25%)
Pkinase_Tyr 803..1072 CDD:285015 100/393 (25%)
PTKc 807..1073 CDD:270623 100/390 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 287 1.000 Inparanoid score I1712
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D126783at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X787
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.870

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