DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvr and kin-16

DIOPT Version :10

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_496017.1 Gene:kin-16 / 174499 WormBaseID:WBGene00002200 Length:495 Species:Caenorhabditis elegans


Alignment Length:530 Identity:140/530 - (26%)
Similarity:238/530 - (44%) Gaps:137/530 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   862 VWFGVILFLILIGLCVFLAVRYQK----EHKRHLA-------LKAAGLANFEEGAVGHINPDLTL 915
            |:|.|...|:|:....||..|.::    |.::::|       |:..|.|..||      ..:..|
 Worm    62 VFFVVYGLLVLLAFIAFLVWRLRRSKTQEKRKNMALMNIYSDLRDTGDAMPEE------LKNRPL 120

  Fly   916 DEQAELLPYNREFEFPRENLKLGKQLGAGAFGVVLKG-----EAKGIRREEPTTTVAVKMVKATA 975
            :::.:.|||.:::|...|||:....||:|.||||.||     ..|....::...|||||......
 Worm   121 NDKLDYLPYKKQYEIASENLENKSILGSGNFGVVRKGILKMASPKNEEEKKMRLTVAVKSAANCY 185

  Fly   976 DNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFIN 1040
            |......|.:||::|..:|:..||:.|:||||..:.|..|:::.||...|:|:.:|:.:|..|  
 Worm   186 DISQTSMLAAELRLMCSIGRFPNVLALVGAVTSELRKGRLLIVTEYIDCGDIRKYLIDHRNVF-- 248

  Fly  1041 QINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDN 1105
                 .||:        :.|.                         .||.:..|.....|:|   
 Worm   249 -----QDHL--------IEDK-------------------------TEPDSYLTPISAKRKN--- 272

  Fly  1106 DPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVT 1170
                                        .|.....|:...:...|:.               ::|
 Worm   273 ----------------------------YVFKNTDENSDYVIKESLD---------------SLT 294

  Fly  1171 TVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCEDNVVKICDFGLARSMYRGDNY--KKSEN 1233
            |.||:|:..|:|.||.||:|..::|.|||.||:||.::..::|.|||:||:......|  :|:::
 Worm   295 TSDLLSFGLQIANGMQYLASIPMVHRDLALRNVLLKKNKTIRIADFGMARTHENKSYYIPQKTKD 359

  Fly  1234 GKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKPK 1298
            ..:|::|::.|:.....|:..|||||:||.|:|:|:|.::|||.: |::.::..::.|.|..:|:
 Worm   360 APVPVRWMSPEAFDTMKFTEKSDVWSFGICLYEIFTLGQLPYPDV-PSERIYEYMHSGRRCPQPQ 423

  Fly  1299 FANQELYEIMLECWRKNPESRPLFAELEKRFANMLGEDVASHYLDLNNPYMQSNIEYMKKQSTDY 1363
            ..:.|||::|..||.:.||.||.|:...:.|                       |.:|||.::  
 Worm   424 HCHVELYDLMKLCWHEKPELRPNFSNCVEYF-----------------------IGHMKKSAS-- 463

  Fly  1364 LALMGSPDEL 1373
             .|:.:.||:
 Worm   464 -KLLENVDEM 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG_like 346..432 CDD:214653
Ig strand C 363..366 CDD:409353
Ig strand E 396..400 CDD:409353
Ig strand F 410..415 CDD:409353
Ig strand G 425..428 CDD:409353
Ig 458..533 CDD:472250
Ig strand B 459..463 CDD:409353
Ig strand C 472..476 CDD:409353
Ig strand E 497..503 CDD:409353
Ig strand F 513..518 CDD:409353
Ig 671..>742 CDD:472250
Ig strand B 674..678 CDD:409353
Ig strand C 687..691 CDD:409353
Ig strand E 717..721 CDD:409353
Ig strand F 731..736 CDD:409353
Ig 779..851 CDD:472250
Ig strand B 781..785 CDD:409570
Ig strand C 794..798 CDD:409570
Ig strand E 816..821 CDD:409570
Ig strand F 831..836 CDD:409570
Ig strand G 844..847 CDD:409570
Protein Kinases, catalytic domain 927..1332 CDD:473864 114/411 (28%)
kin-16NP_496017.1 PTKc 145..454 CDD:270623 109/395 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.