DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and Fgfr4

DIOPT Version :10

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:XP_006517162.3 Gene:Fgfr4 / 14186 MGIID:95525 Length:829 Species:Mus musculus


Alignment Length:944 Identity:245/944 - (25%)
Similarity:364/944 - (38%) Gaps:341/944 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   607 GKLSVERIYEVSFLPTEPGILTCIAQNIIDGKERRTLTKAHVLLGNISENMTIYGFDKD------ 665
            |:|.:     .||||.:.|...|:|        |.::|..|.|...:.:::|....|:|      
Mouse   111 GRLEI-----ASFLPEDAGRYLCLA--------RGSMTVVHNLTLLMDDSLTSISNDEDPKTLSS 162

  Fly   666 ------------------------HKIAKEDNVNFTCEALAYHFDGN----LKWFINGEDLKESD 702
                                    |.:...:.|.|.|.|.     ||    :.|      ||:..
Mouse   163 SSSGHVYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPAA-----GNPMPTIHW------LKDGQ 216

  Fly   703 SVH-------IETSHTKYSYKSTVHITTISDRDRGTYECRAYHNDKDAVYSSREIDLYVHDPSAP 760
            :.|       |...|..:|    :.:.::...|||||.| ...|...::..|..:|:....|..|
Mouse   217 AFHGENRIGGIRLRHQHWS----LVMESVVPSDRGTYTC-LVENSLGSIRYSYLLDVLERSPHRP 276

  Fly   761 QWTNGGQEGHSKIKRKLSQTLELECA--STAVPVAIVRWFKDDKEVTESKLRHIIEKESK----- 818
            ....|.....:.:   :...:||.|.  |.|.|  .::|           |:|::...|.     
Mouse   277 ILQAGLPANTTAV---VGSDVELLCKVYSDAQP--HIQW-----------LKHVVINGSSFGADG 325

  Fly   819 -------------------LLITHLYPGDEGVYKCVVENRLDRIERSFTVVISDLPGISMAWV-- 862
                               |.:.::...|.|.|.|:..|.:....:|..:.:  ||...:.|.  
Mouse   326 FPYVQVLKTTDINSSEVEVLYLRNVSAEDAGEYTCLAGNSIGLSYQSAWLTV--LPEEDLTWTTA 388

  Fly   863 -----WFGVILF----LILIGLCVFLAVRYQKEHKRH---------------------LALKAAG 897
                 :..:||:    |:|:.|.:...|.:::..:.|                     |..:::|
Mouse   389 TPEARYTDIILYVSGSLVLLVLLLLAGVYHRQVIRGHYSRQPVTIQKLSRFPLARQFSLESRSSG 453

  Fly   898 LANFE--EGA----------VGHINPDLTLDEQAELLPYNREFEFPRENLKLGKQLGAGAFGVVL 950
            .::..  .|.          .|.:|.||.||..         :||||:.|.|||.||.|.||.|:
Mouse   454 KSSLSLVRGVRLSSSGPPLLTGLVNLDLPLDPL---------WEFPRDRLVLGKPLGEGCFGQVV 509

  Fly   951 KGEAKGI--RREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKR 1013
            :.||.|:  .|.:.|:||||||:|..|.::.:..||||:::|..:|:|.|::||||..|:   :.
Mouse   510 RAEAFGMDPSRPDQTSTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLLGVCTQ---EG 571

  Fly  1014 ELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANV 1078
            .|.||||....||::.||...|                                           
Mouse   572 PLYVIVECAAKGNLREFLRARR------------------------------------------- 593

  Fly  1079 GFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDD 1143
                             ||....:.|. |||       ..|..::                    
Mouse   594 -----------------PPGPDLSPDG-PRS-------SEGPLSF-------------------- 613

  Fly  1144 QIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCED 1208
                     ||                   |:|.|:||||||.||.|:|.:|.||||||:|:.||
Mouse   614 ---------PA-------------------LVSCAYQVARGMQYLESRKCIHRDLAARNVLVTED 650

  Fly  1209 NVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKV 1273
            :|:||.||||||.::..|.|||:.||:||:||:|.|:|.|.|::..|||||:||:|||:|:|...
Mouse   651 DVMKIADFGLARGVHHIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGS 715

  Fly  1274 PYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEKRFANMLGEDVA 1338
            ||||| |.:|||:.|.:|:|||:|.....|||.:|.|||...|..||.|.:|.:....:| ..|:
Mouse   716 PYPGI-PVEELFSLLREGHRMERPPNCPSELYGLMRECWHAAPSQRPTFKQLVEALDKVL-LAVS 778

  Fly  1339 SHYLDLN---NPYMQSNIEYMKKQSTDYLALMGSPDELAPAAPRYVNGHIVPDIRIEELPDDYME 1400
            ..||||.   .|:..||                                           .|...
Mouse   779 EEYLDLRLTFGPFSPSN-------------------------------------------GDASS 800

  Fly  1401 MSRDSDPDACTAIFSPTRLEGESSDFPDFSSETT 1434
            ....||     ::||...|..|.|.||...|:||
Mouse   801 TCSSSD-----SVFSHDPLPLEPSPFPFSDSQTT 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG_like 346..432 CDD:214653
Ig strand C 363..366 CDD:409353
Ig strand E 396..400 CDD:409353
Ig strand F 410..415 CDD:409353
Ig strand G 425..428 CDD:409353
Ig 458..533 CDD:472250
Ig strand B 459..463 CDD:409353
Ig strand C 472..476 CDD:409353
Ig strand E 497..503 CDD:409353
Ig strand F 513..518 CDD:409353
Ig 671..>742 CDD:472250 20/81 (25%)
Ig strand B 674..678 CDD:409353 2/3 (67%)
Ig strand C 687..691 CDD:409353 2/7 (29%)
Ig strand E 717..721 CDD:409353 0/3 (0%)
Ig strand F 731..736 CDD:409353 3/4 (75%)
Ig 779..851 CDD:472250 17/97 (18%)
Ig strand B 781..785 CDD:409570 2/3 (67%)
Ig strand C 794..798 CDD:409570 0/3 (0%)
Ig strand E 816..821 CDD:409570 2/28 (7%)
Ig strand F 831..836 CDD:409570 2/4 (50%)
Ig strand G 844..847 CDD:409570 0/2 (0%)
Protein Kinases, catalytic domain 927..1332 CDD:473864 145/406 (36%)
Fgfr4XP_006517162.3 IG_like 70..143 CDD:214653 13/44 (30%)
Ig strand B 80..84 CDD:409353
Ig strand E 111..115 CDD:409353 2/3 (67%)
Ig strand F 125..130 CDD:409353 1/4 (25%)
Ig 174..268 CDD:472250 22/109 (20%)
Ig strand B 195..199 CDD:409353 2/3 (67%)
Ig strand C 208..212 CDD:409353 1/9 (11%)
Ig strand E 234..238 CDD:409353 1/7 (14%)
Ig strand F 248..253 CDD:409353 3/5 (60%)
Ig strand G 261..264 CDD:409353 0/2 (0%)
Ig 276..378 CDD:472250 19/119 (16%)
Ig strand B 294..298 CDD:409353 2/3 (67%)
Ig strand C 307..311 CDD:409353 1/14 (7%)
Ig strand E 343..347 CDD:409353 1/3 (33%)
Ig strand F 357..362 CDD:409353 2/4 (50%)
Ig strand G 370..373 CDD:409353 0/2 (0%)
PTKc_FGFR4 481..794 CDD:133230 155/442 (35%)
Blue background indicates that the domain is not in the aligned region.

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