DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pvr and Fgfr2

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_034337.2 Gene:Fgfr2 / 14183 MGIID:95523 Length:840 Species:Mus musculus


Alignment Length:876 Identity:229/876 - (26%)
Similarity:338/876 - (38%) Gaps:323/876 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   702 DSVHIETSHTKYSYKSTVHITTISDRDRGTYECRAYH--------------------NDKDAVYS 746
            |.||:..::........:.|...:.||.|.|.|.|..                    :|:|...|
Mouse    94 DGVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWYFMVNVTDAISSGDDEDDTDS 158

  Fly   747 SREIDLYVHD----PSAPQWTNGGQEGHSKIKRKL-----SQTLELECASTAVPVAIVRWFKDDK 802
            |.::   |.:    ..||.|||     ..|::::|     :.|::..|.:...|...:||.|:.|
Mouse   159 SEDV---VSENRSNQRAPYWTN-----TEKMEKRLHAVPAANTVKFRCPAGGNPTPTMRWLKNGK 215

  Fly   803 EVTES------KLRHIIEKESKLLITHLYPGDEGVYKCVVEN---------RLDRIERS------ 846
            |..:.      |:|:   :...|::..:.|.|:|.|.|:|||         .||.:|||      
Mouse   216 EFKQEHRIGGYKVRN---QHWSLIMESVVPSDKGNYTCLVENEYGSINHTYHLDVVERSPHRPIL 277

  Fly   847 --------FTVVISD--------------------------------LP---------------- 855
                    .|||..|                                ||                
Mouse   278 QAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKE 342

  Fly   856 -------------------------GISMAWVW--------------------------FGVILF 869
                                     |||....|                          .||.|.
Mouse   343 IEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLTVLPAPVREKEITASPDYLEIAIYCIGVFLI 407

  Fly   870 LILIGLCVFLAVRYQKE----------HK--RHLALKAAGLANFEEGAVGHINPDLT-----LDE 917
            ..::...:|..::...:          ||  :.:.|:.....:.|..:..:.|..|.     |..
Mouse   408 ACMVVTVIFCRMKTTTKKPDFSSQPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSS 472

  Fly   918 QAEL----------LPYNREFEFPRENLKLGKQLGAGAFGVVLKGEAKGIRREEP--TTTVAVKM 970
            .|:.          ||.:.::||||:.|.|||.||.|.||.|:..||.||.:::|  ..||||||
Mouse   473 TADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM 537

  Fly   971 VKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFLLRNR 1035
            :|..|..:.:..||||:::|..:|:|.|::|||||.|::   ..|.|||||...||::.:|...|
Mouse   538 LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD---GPLYVIVEYASKGNLREYLRARR 599

  Fly  1036 KCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHR 1100
                                                                        ||   
Mouse   600 ------------------------------------------------------------PP--- 601

  Fly  1101 RNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTE 1165
                               ...||||         :..|||:.                      
Mouse   602 -------------------GMEYSYD---------INRVPEEQ---------------------- 616

  Fly  1166 AMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCEDNVVKICDFGLARSMYRGDNYKK 1230
               :|..||:|..:|:||||:||:|:|.:|.||||||:|:.|:||:||.||||||.:...|.|||
Mouse   617 ---MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 678

  Fly  1231 SENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNKLNDGYRME 1295
            :.||:||:||:|.|:|.|.|::..|||||:|:::||:|:|...||||| |.:|||..|.:|:||:
Mouse   679 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMD 742

  Fly  1296 KPKFANQELYEIMLECWRKNPESRPLFAELEKRFANMLGEDVASHYLDLNNPYMQSNIEYMKKQS 1360
            ||.....|||.:|.:||...|..||.|.:|.:....:|.......||||..|..|.:..|...:|
Mouse   743 KPTNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLTQPLEQYSPSYPDTRS 807

  Fly  1361 T----DYLALMGSPDELAPAAPRY--VNGHI 1385
            :    |.......|....|..|:|  :||.:
Mouse   808 SCSSGDDSVFSPDPMPYEPCLPQYPHINGSV 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845
IG_like 672..754 CDD:214653 14/71 (20%)
Ig 674..739 CDD:143165 10/56 (18%)
IGc2 779..840 CDD:197706 19/75 (25%)
PKc_like 927..1332 CDD:304357 143/406 (35%)
Pkinase_Tyr 935..1329 CDD:285015 139/395 (35%)
Fgfr2NP_034337.2 Ig 66..143 CDD:325142 10/48 (21%)
Ig2_FGFR 183..267 CDD:143265 21/86 (24%)
Ig3_FGFR-2 290..379 CDD:143266 7/88 (8%)
PTKc_FGFR2 475..787 CDD:270679 146/431 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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