DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and Fgfr1

DIOPT Version :10

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_034336.2 Gene:Fgfr1 / 14182 MGIID:95522 Length:822 Species:Mus musculus


Alignment Length:890 Identity:228/890 - (25%)
Similarity:344/890 - (38%) Gaps:339/890 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   688 NLKWFINGEDLKESDSVHIETSHTKYSYKSTVHITTISDRDRGTYEC---------RAYH--NDK 741
            ::.|..:|..|.||:...|....        |.:......|.|.|.|         ..|.  |..
Mouse    63 SINWLRDGVQLVESNRTRITGEE--------VEVRDSIPADSGLYACVTSSPSGSDTTYFSVNVS 119

  Fly   742 DAVYSSREIDLYVHD------------------PSAPQWTNGGQEGHSKIKRKL-----SQTLEL 783
            ||:.||.:.|   .|                  |.||.||:     ..|:::||     ::|::.
Mouse   120 DALPSSEDDD---DDDDSSSEEKETDNTKPNRRPVAPYWTS-----PEKMEKKLHAVPAAKTVKF 176

  Fly   784 ECASTAVPVAIVRW------FKDDKEVTESKLRHIIEKESKLLITHLYPGDEGVYKCVVEN---- 838
            :|.|:..|...:||      ||.|..:...|:|:   ....:::..:.|.|:|.|.|:|||    
Mouse   177 KCPSSGTPNPTLRWLKNGKEFKPDHRIGGYKVRY---ATWSIIMDSVVPSDKGNYTCIVENEYGS 238

  Fly   839 -----RLDRIERS---------------------------------------------------- 846
                 :||.:|||                                                    
Mouse   239 INHTYQLDVVERSPHRPILQAGLPANKTVALGSNVEFMCKVYSDPQPHIQWLKHIEVNGSKIGPD 303

  Fly   847 -----------------------------------FTVVISDLPGISMAWVWFGVI--------- 867
                                               :|.:..:..|:|....|..|:         
Mouse   304 NLPYVQILKTAGVNTTDKEMEVLHLRNVSFEDAGEYTCLAGNSIGLSHHSAWLTVLEALEERPAV 368

  Fly   868 ----LFLILIGLC--VFL-------AVRYQKE--------------HK--------RHLALKAAG 897
                |:|.:|..|  .||       .:.|:.:              ||        |.:.:.|..
Mouse   369 MTSPLYLEIIIYCTGAFLISCMLGSVIIYKMKSGTKKSDFHSQMAVHKLAKSIPLRRQVTVSADS 433

  Fly   898 LANFEEGAV--------GHINPDLTLDEQAELLPYNREFEFPRENLKLGKQLGAGAFGVVLKGEA 954
            .|:...|.:        ....|.|....:.| ||.:..:|.||:.|.|||.||.|.||.|:..||
Mouse   434 SASMNSGVLLVRPSRLSSSGTPMLAGVSEYE-LPEDPRWELPRDRLVLGKPLGEGCFGQVVLAEA 497

  Fly   955 KGIRREEP--TTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMV 1017
            .|:.:::|  .|.|||||:|:.|..:.:..|:||:::|..:|:|.|::|||||.|::   ..|.|
Mouse   498 IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD---GPLYV 559

  Fly  1018 IVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPI 1082
            ||||...||::.:|...|.                                  .||:|.      
Mouse   560 IVEYASKGNLREYLQARRP----------------------------------PGLEYC------ 584

  Fly  1083 HSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDDQIMS 1147
               .|..||                                                ||:.    
Mouse   585 ---YNPSHN------------------------------------------------PEEQ---- 594

  Fly  1148 NNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCEDNVVK 1212
                                 :::.||:|.|:||||||:||:|||.:|.||||||:|:.||||:|
Mouse   595 ---------------------LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 638

  Fly  1213 ICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPG 1277
            |.||||||.::..|.|||:.||:||:||:|.|:|.|.:::..|||||:|::|||:|:|...||||
Mouse   639 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 703

  Fly  1278 IDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEKRFANMLGEDVASHYL 1342
            : |.:|||..|.:|:||:||.....|||.:|.:||...|..||.|.:|.:....::.......||
Mouse   704 V-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYL 767

  Fly  1343 DLNNPYMQSNIEYMKKQSTDYLALMGS-------PDELAPAAPRY 1380
            ||:.|..|.:..:...:|:...:...|       |:|  |..||:
Mouse   768 DLSIPLDQYSPSFPDTRSSTCSSGEDSVFSHEPLPEE--PCLPRH 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG_like 346..432 CDD:214653
Ig strand C 363..366 CDD:409353
Ig strand E 396..400 CDD:409353
Ig strand F 410..415 CDD:409353
Ig strand G 425..428 CDD:409353
Ig 458..533 CDD:472250
Ig strand B 459..463 CDD:409353
Ig strand C 472..476 CDD:409353
Ig strand E 497..503 CDD:409353
Ig strand F 513..518 CDD:409353
Ig 671..>742 CDD:472250 13/64 (20%)
Ig strand B 674..678 CDD:409353
Ig strand C 687..691 CDD:409353 0/2 (0%)
Ig strand E 717..721 CDD:409353 1/3 (33%)
Ig strand F 731..736 CDD:409353 2/13 (15%)
Ig 779..851 CDD:472250 25/173 (14%)
Ig strand B 781..785 CDD:409570 0/3 (0%)
Ig strand C 794..798 CDD:409570 2/9 (22%)
Ig strand E 816..821 CDD:409570 0/4 (0%)
Ig strand F 831..836 CDD:409570 2/4 (50%)
Ig strand G 844..847 CDD:409570 3/89 (3%)
Protein Kinases, catalytic domain 927..1332 CDD:473864 141/406 (35%)
Fgfr1NP_034336.2 IgI_1_FGFR 25..118 CDD:409362 12/62 (19%)
Ig strand A 25..28 CDD:409362
Ig strand A' 40..46 CDD:409362
Ig strand B 49..59 CDD:409362
Ig strand C 63..68 CDD:409362 1/4 (25%)
Ig strand C' 71..73 CDD:409362 0/1 (0%)
Ig strand D 78..82 CDD:409362 0/3 (0%)
Ig strand E 85..90 CDD:409362 1/12 (8%)
Ig strand F 96..105 CDD:409362 3/8 (38%)
Ig strand G 108..118 CDD:409362 1/9 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..162 12/49 (24%)
IgI_2_FGFR 153..247 CDD:409443 26/101 (26%)
Ig strand A 153..156 CDD:409443 1/2 (50%)
Heparin-binding 160..177 4/16 (25%)
Ig strand A' 164..169 CDD:409443 2/4 (50%)
Ig strand B 173..181 CDD:409443 2/7 (29%)
Ig strand C 187..192 CDD:409443 2/4 (50%)
Ig strand C' 195..197 CDD:409443 0/1 (0%)
Ig strand D 206..209 CDD:409443 1/2 (50%)
Ig strand E 213..218 CDD:409443 0/4 (0%)
Ig strand F 227..234 CDD:409443 3/6 (50%)
Ig strand G 237..247 CDD:409443 1/9 (11%)
Ig 255..359 CDD:472250 4/103 (4%)
Ig strand B 273..277 CDD:409353 0/3 (0%)
Ig strand C 286..290 CDD:409353 0/3 (0%)
Ig strand E 324..328 CDD:409353 0/3 (0%)
Ig strand F 338..343 CDD:409353 1/4 (25%)
Ig strand G 351..354 CDD:409353 0/2 (0%)
PTKc_FGFR1 464..765 CDD:270678 144/421 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 782..822 7/31 (23%)
Blue background indicates that the domain is not in the aligned region.

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