DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and Csf1r

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_001032948.2 Gene:Csf1r / 12978 MGIID:1339758 Length:977 Species:Mus musculus


Alignment Length:1423 Identity:325/1423 - (22%)
Similarity:502/1423 - (35%) Gaps:537/1423 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PLLLILRISWSDAVPLQQFSPDPDDSIENCGGENGAPLMTPCKSAIILDAQTSTTLKCEDDEPMS 75
            ||:|:|...|..                     .|||::.|....::::...:.||:|..:..:.
Mouse     6 PLVLLLATVWHG---------------------QGAPVIEPSGPELVVEPGETVTLRCVSNGSVE 49

  Fly    76 WWTSQSQYVHVKSFDNTEDPARPFGTSLHLIEVTADYVAAYYCVKTSKFSQIAKEEQSDEAMIEL 140
            |....|.|.       |.||..| |::|.....|......|.|.           |..|.     
Mouse    50 WDGPISPYW-------TLDPESP-GSTLTTRNATFKNTGTYRCT-----------ELEDP----- 90

  Fly   141 VNQGYASSIYVYVNDPDTKLVDSHNV----VTARQYTDVVIPC---KPAMPDTEVLLETSNGEMH 198
              ...:::|::||.||    ..|.|:    ||..:..:.|:||   .||:.|: |.|....|...
Mouse    91 --MAGSTTIHLYVKDP----AHSWNLLAQEVTVVEGQEAVLPCLITDPALKDS-VSLMREGGRQV 148

  Fly   199 SSKSVGRYDPQRGFTIEIRSIVDGGDYYCRPNPPFPHNEEEMTSIEVRFIATGLDIPRTQTTNMV 263
            ..|:|..:.|.|||.|....::|...|.|:...    |..|.||       ||:.:    ..|.|
Mouse   149 LRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMV----NGRESTS-------TGIWL----KVNRV 198

  Fly   264 YTYAPGVT-----------DGDDEVLTVTNQSTGNLALIRGGDGTLSRERARRSPARLAPMNASP 317
            :...|.:.           :....|.:.||...|...:::.||..|.           .|:|:. 
Mouse   199 HPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLE-----------IPLNSD- 251

  Fly   318 SPRPGQDGKPLPKPVIRSSVEHHVFTDTNFTLDCEQSAYVESVYGMEWFTPSRDENRIFASQSRT 382
                                    |.|.          |.:.|..:.                  
Mouse   252 ------------------------FQDN----------YYKKVRALS------------------ 264

  Fly   383 DPKTRNSTHQTGRSTLTVLNAQP-SDTGLYKCVTTDNSNQNVQRATYRIKVLKQNESYLNVGEPS 446
                              |||.. .|.|:|.||.  :::...:.||...:|::  .:|||:  .|
Mouse   265 ------------------LNAVDFQDAGIYSCVA--SNDVGTRTATMNFQVVE--SAYLNL--TS 305

  Fly   447 GHYNVQEYA-NRTIQMTANFEGFPT-PSFSW--FKPDGTEVRQSE---------NNFKILSTELS 498
            ....:||.: ..::.:|.:.:.:|: ..::|  ..|...:.|:.|         ..||:.     
Mouse   306 EQSLLQEVSVGDSLILTVHADAYPSIQHYNWTYLGPFFEDQRKLEFITQRAIYRYTFKLF----- 365

  Fly   499 TMLQVLN-AQLQDSGTYVLRGSNSFGVVQREYNVSVMDAPALKMSDAYVQVGSVARLECTVRSYP 562
                 || .:..::|.|.|...|..|.....:.:::...|  ::|..::.|.....|.|.|..||
Mouse   366 -----LNRVKASEAGQYFLMAQNKAGWNNLTFELTLRYPP--EVSVTWMPVNGSDVLFCDVSGYP 423

  Fly   563 PAIVTFFFRPCSLEPQWPTCSVLNQNFSLPSEQEKYQFQTRPRPGKLSVERIYEVSFL----PTE 623
            ...||           |..|                         :...:|..|...|    .|.
Mouse   424 QPSVT-----------WMEC-------------------------RGHTDRCDEAQALQVWNDTH 452

  Fly   624 PGILTCIAQNIIDGKERRTLTKAHVLLGNISENMTIYGFDKDHKIAKEDNVNFTCEALAYHFDGN 688
            |.:|   :|...|    :.:.::.:.:|.:..||                               
Mouse   453 PEVL---SQKPFD----KVIIQSQLPIGTLKHNM------------------------------- 479

  Fly   689 LKWFINGEDLKESDSVHIETSHTKYSYKSTVHITTISDRDRGTYECRAYHNDKDAVYSSREIDLY 753
                                                      ||.|:.:::..::....|.:.| 
Mouse   480 ------------------------------------------TYFCKTHNSVGNSSQYFRAVSL- 501

  Fly   754 VHDPSAPQWTNGGQEGHSKIKRKLSQTLELECASTAVPVAIVRWFKDDKEVTESKLRHIIEKESK 818
                           |.||         :|...|...||.:.                       
Mouse   502 ---------------GQSK---------QLPDESLFTPVVVA----------------------- 519

  Fly   819 LLITHLYPGDEGVYKCVVENRLDRIERSFTVVISDLPGISMAWVWFGVILFLILIGLCVFLAVRY 883
                           |:                             .|:..|:|  |.:.|..:|
Mouse   520 ---------------CM-----------------------------SVMSLLVL--LLLLLLYKY 538

  Fly   884 QKEHKRHLALKAAGLANFEEGAVGHINPDLTLDEQAELLPYNREFEFPRENLKLGKQLGAGAFGV 948
            :::.|..:..|.  :..:|..:...|:|        ..||||.::||||.||:.||.|||||||.
Mouse   539 KQKPKYQVRWKI--IERYEGNSYTFIDP--------TQLPYNEKWEFPRNNLQFGKTLGAGAFGK 593

  Fly   949 VLKGEAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKR 1013
            |::..|.|:.:|:....|||||:|:||..:...||:||||||.|||||.|:||||||.|..   .
Mouse   594 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG---G 655

  Fly  1014 ELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANV 1078
            .::||.|||.:|::.|||.|..:..:.          ||:...:.|:          |...|.| 
Mouse   656 PVLVITEYCCYGDLLNFLRRKAEAMLG----------PSLSPGQDSE----------GDSSYKN- 699

  Fly  1079 GFPIH---SYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVP 1140
               ||   .|:             ||:|          |.:..|..||...|.:.|.::      
Mouse   700 ---IHLEKKYV-------------RRDS----------GFSSQGVDTYVEMRPVSTSSS------ 732

  Fly  1141 EDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILL 1205
              |.....:           .|...:..:...||:.::.|||:||.:|:||..:|.|:||||:||
Mouse   733 --DSFFKQD-----------LDKEASRPLELWDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 784

  Fly  1206 CEDNVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSL 1270
            ...:|.||.||||||.:....||....|.:||:||:|.||:.|.|::..||||||||:|||:|||
Mouse   785 TSGHVAKIGDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 849

  Fly  1271 AKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLF----------AEL 1325
            ...|||||..|.:.:..:.|||:|.:|.||.:.:|.||..||...|..||.|          |.|
Mouse   850 GLNPYPGILVNNKFYKLVKDGYQMAQPVFAPKNIYSIMQSCWDLEPTRRPTFQQICFLLQEQARL 914

  Fly  1326 EKR---FANMLG----------------------EDVASHYL------DLNNPYMQSN 1352
            |:|   :||:..                      |:.:|.:|      |:..|.:|.|
Mouse   915 ERRDQDYANLPSSGGSSGSDSGGGSSGGSSSEPEEESSSEHLACCEPGDIAQPLLQPN 972

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652 12/86 (14%)
Ig <363..432 CDD:299845 10/69 (14%)
Ig 466..533 CDD:299845 14/79 (18%)
IG_like 672..754 CDD:214653 5/81 (6%)
Ig 674..739 CDD:143165 3/64 (5%)
IGc2 779..840 CDD:197706 5/60 (8%)
PKc_like 927..1332 CDD:304357 158/420 (38%)
Pkinase_Tyr 935..1329 CDD:285015 152/409 (37%)
Csf1rNP_001032948.2 ig 25..85 CDD:278476 15/67 (22%)
IG_like 28..101 CDD:214653 18/98 (18%)
IG_like 113..195 CDD:214653 27/97 (28%)
Ig 113..179 CDD:299845 21/66 (32%)
ig 207..293 CDD:278476 23/169 (14%)
IG_like 209..295 CDD:214653 23/169 (14%)
Ig4_SCFR_like 299..398 CDD:143176 21/110 (19%)
IG_like 311..395 CDD:214653 17/93 (18%)
Regulatory juxtamembrane domain. /evidence=ECO:0000250 540..572 9/41 (22%)
PTKc_CSF-1R 541..913 CDD:133237 162/450 (36%)
Pkinase_Tyr 580..904 CDD:285015 148/392 (38%)
Activation loop. /evidence=ECO:0000250 794..816 9/21 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 921..957 4/35 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11656
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D126783at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43420
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4986
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.850

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