DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and Fgfrl1

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_473412.1 Gene:Fgfrl1 / 116701 MGIID:2150920 Length:529 Species:Mus musculus


Alignment Length:473 Identity:97/473 - (20%)
Similarity:153/473 - (32%) Gaps:171/473 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 RTIQMTANFEGFPTPSFSWFKPDGTEVRQSENNFKILSTELSTMLQVLNAQLQDSGTYVLRGSNS 521
            ||:::....||.|.|...|.| ||..:....:.|::|...    |:|...:.:|:|.||.:.:|.
Mouse    41 RTVRLQCPVEGDPPPLTMWTK-DGRTIHSGWSRFRVLPQG----LKVKEVEAEDAGVYVCKATNG 100

  Fly   522 FGVVQREYNVSVMD--APALKMSDAYVQVGSVARLECTVRSYPPAIVTFFFRPCSLEPQWPTCSV 584
            ||.:...|.:.:||  :|.   .::....||....|      .||           ..||     
Mouse   101 FGSLSVNYTLIIMDDISPG---KESPGPGGSSGGQE------DPA-----------SQQW----- 140

  Fly   585 LNQNFSLPSEQEKYQFQTRPRPGKLSVERIYEVSFLPTEPGILTCIAQNIIDGKERRTLTKAHVL 649
            ....|:.||:..:   :...||...||.              |.|:|..                
Mouse   141 ARPRFTQPSKMRR---RVIARPVGSSVR--------------LKCVASG---------------- 172

  Fly   650 LGNISENMTIYGFDKDHKIAKEDNVNFTCEALAYHFDGNLKWFINGEDLKESDSVHIETS-HTKY 713
                                              |...::.|..:.:.|     .|:|.| |.| 
Mouse   173 ----------------------------------HPRPDIMWMKDDQTL-----THLEASEHRK- 197

  Fly   714 SYKSTVHITTISDRDRGTYECRAYHNDKDAVYSSREIDLYVHDPSAPQWTN----------GGQE 768
             .|.|:.:..:...|.|.|.||. .|...|:.::.::|:.....|.|..|.          ||  
Mouse   198 -KKWTLSLKNLKPEDSGKYTCRV-SNKAGAINATYKVDVIQRTRSKPVLTGTHPVNTTVDFGG-- 258

  Fly   769 GHSKIKRKLSQTLELECASTAVPVAIVRWFKDDKEVTESKLRHIIEKE----------------- 816
                       |...:|...:....:::|.|..:..:|.:....|:..                 
Mouse   259 -----------TTSFQCKVRSDVKPVIQWLKRVEYGSEGRHNSTIDVGGQKFVVLPTGDVWSRPD 312

  Fly   817 ----SKLLITHLYPGDEGVYKCVVENRLDRIERS-FTVVISD--LPGISMA---------W-VWF 864
                :||||:.....|.|:|.|:..|.:....|| |..|:.|  .||..||         | |..
Mouse   313 GSYLNKLLISRARQDDAGMYICLGANTMGYSFRSAFLTVLPDPKPPGPPMASSSSSTSLPWPVVI 377

  Fly   865 GV------ILFLILIGLC 876
            |:      ||..:|:.||
Mouse   378 GIPAGAVFILGTVLLWLC 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845 20/66 (30%)
IG_like 672..754 CDD:214653 18/82 (22%)
Ig 674..739 CDD:143165 15/65 (23%)
IGc2 779..840 CDD:197706 15/81 (19%)
PKc_like 927..1332 CDD:304357
Pkinase_Tyr 935..1329 CDD:285015
Fgfrl1NP_473412.1 I-set 29..112 CDD:369462 22/75 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..151 11/59 (19%)
Ig2_FGFRL1-like 153..234 CDD:143264 24/155 (15%)
Ig 257..351 CDD:386229 20/106 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..427
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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