DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and fgfr3

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:XP_012812743.1 Gene:fgfr3 / 100196923 XenbaseID:XB-GENE-479255 Length:829 Species:Xenopus tropicalis


Alignment Length:933 Identity:247/933 - (26%)
Similarity:355/933 - (38%) Gaps:353/933 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   657 MTIYGFDKDHKIAKE---------DNVNFT------CEALAYHFDGNLKWFINGEDLKESDSVHI 706
            :|:.|.|:..:.|.:         |.:.||      ....|.......|||        .|.:.|
 Frog    44 VTLPGEDRASRKASDYITVEQPPFDELMFTIGETIELSCAAEDASTTTKWF--------KDGIAI 100

  Fly   707 ETSHTKYSYKSTVHITTISDRDRGTYECRAYH-------------------NDKDAVYSSREIDL 752
            ..::...:.:..:.|..||..|.|.|.||.:|                   :|:|      :.|.
 Frog   101 VPNNRTNTRQGLLKIINISYDDSGIYSCRLWHSTEILRNFTIRVTDLPSSGDDED------DDDE 159

  Fly   753 YVHDPSAPQWTNGGQEGHSKIKRKL-----SQTLELECASTAVPVAIVRWFKDDKE------VTE 806
            ...|...|:||.     ..|:.:||     :.|:...|.:...|...:.|.|:.||      :..
 Frog   160 ETEDREPPRWTQ-----PEKMDKKLTAVPAANTIRFRCPAAGNPTPTIHWLKNGKEFRGEHRIGG 219

  Fly   807 SKLRHIIEKESKLLITHLYPGDEGVYKCVVENR---------LDRIERSF-------------TV 849
            .||||   ::..|::..:.|.|:|.|.|||||:         ||.:|||.             ||
 Frog   220 IKLRH---QQWSLVMESVVPSDKGNYTCVVENKYGSIRQTYQLDVLERSSHRPILQAGLPANQTV 281

  Fly   850 VI-SDLP---------------------------------------------------------- 855
            || ||:.                                                          
 Frog   282 VIGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKYGPDGDPYVTVLQSFTNGTEVDTTLSLKNVTET 346

  Fly   856 -------------GISMAWVWFGV-----------------------ILFLILIG--LCVFLAVR 882
                         |::.|..|..:                       |:..::.|  |.|.:.|.
 Frog   347 HEGQYVCRANNFIGVAEASFWLHIYKPASAEPVEKPTTTSSSSTTVLIVVSVITGFILLVIIFVT 411

  Fly   883 YQKEHKRHLALKAAGL------------ANFEEGAVGHINPDLT------------LDEQAEL-L 922
            |:.:.....|:.|..:            .:.|..:..:.|..|.            |...:|| |
 Frog   412 YRVKVPSKKAMSAPPVHKVSKFPLKRQQVSLESNSSMNSNTPLVRITHLSSSDGTMLANVSELGL 476

  Fly   923 PYNREFEFPRENLKLGKQLGAGAFGVVLKGEAKGIRREEPT--TTVAVKMVKATADNEVVRALVS 985
            |.:.::|..|..|.|||.||.|.||.|:..||.||.:|.|.  .||||||:|..|.::.:..|||
 Frog   477 PLDPKWELLRTRLTLGKPLGEGCFGQVVMAEAIGIEKERPNKPVTVAVKMLKDDATDKDLSDLVS 541

  Fly   986 ELKIMVHLGQHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHID 1050
            |:::|..:|:|.|::|||||.|::   ..|.|:|||...||::.:|...|               
 Frog   542 EMEMMKMIGKHKNIINLLGACTQD---GPLYVLVEYASKGNLREYLKARR--------------- 588

  Fly  1051 PSIMTQRMSDNYELHRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGR 1115
                                                         ||                  
 Frog   589 ---------------------------------------------PP------------------ 590

  Fly  1116 TGSGTATYSYDRQMDTCATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQ 1180
                    ..|...|||..                  ||.:..:|            ||:|.|:|
 Frog   591 --------GMDYSFDTCKI------------------PAEQLTFK------------DLVSCAYQ 617

  Fly  1181 VARGMDYLSSKKVLHGDLAARNILLCEDNVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALES 1245
            |||||:||:|:|.:|.||||||:|:.:|||:||.||||||.::..|.|||:.||:||:||:|.|:
 Frog   618 VARGMEYLASQKCIHRDLAARNVLVTDDNVMKIADFGLARDIHNIDYYKKTTNGRLPVKWMAPEA 682

  Fly  1246 LSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLE 1310
            |.|.:::..|||||||::|||.|:|...||||| |.:|||..|.:|:||:||.....|||.||.|
 Frog   683 LFDRIYTHQSDVWSYGVLLWETFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIMRE 746

  Fly  1311 CWRKNPESRPLFAELEKRFANMLGEDVASHYLDLNNPYMQSNIEYMKKQST-----------DYL 1364
            ||...|..||.|.:|.:....:|.......||||:.|:.|.:.......||           |.|
 Frog   747 CWHAVPSQRPTFKQLVEDLDRVLTVTSTDEYLDLSVPFEQYSPACQDSHSTCSSGDDSVFAHDIL 811

  Fly  1365 ALMGSPDELAPAAPRY--VNGHI 1385
                 |||  |..|::  .||.|
 Frog   812 -----PDE--PCLPKHQQYNGAI 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845
IG_like 672..754 CDD:214653 21/106 (20%)
Ig 674..739 CDD:143165 17/89 (19%)
IGc2 779..840 CDD:197706 21/75 (28%)
PKc_like 927..1332 CDD:304357 145/406 (36%)
Pkinase_Tyr 935..1329 CDD:285015 143/395 (36%)
fgfr3XP_012812743.1 IGc2 74..129 CDD:197706 12/62 (19%)
Ig2_FGFR 177..261 CDD:143265 24/86 (28%)
Ig3_FGFR 284..371 CDD:319280 5/86 (6%)
PTKc_FGFR3 476..809 CDD:173652 156/452 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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