DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and styk1

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_001123790.1 Gene:styk1 / 100170540 XenbaseID:XB-GENE-979179 Length:419 Species:Xenopus tropicalis


Alignment Length:587 Identity:134/587 - (22%)
Similarity:199/587 - (33%) Gaps:215/587 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   834 CVVENRLDRIERSFTVVISDLPGISMAWVWFGVILFLILIGLCVFLAVRY-----------QKEH 887
            |:|..:    |....||...|.|:|       |||      |.:.|.:||           |.|.
 Frog    23 CIVRTQ----EYEVIVVPVFLIGVS-------VIL------LAIILWLRYRPRKPDEDDQRQDEQ 70

  Fly   888 KRHLALKAAGLANFEEGAVGHIN-----PDLTLDEQAELL-PYNREFEFPRENLKLGKQL-GAGA 945
            ::..|              |:||     .:||||:..... |..:..|.||..::...|| |.|.
 Frog    71 RKPSA--------------GYINHAISLEELTLDQVLRTKDPSLQALEIPRGRIRQPLQLAGEGR 121

  Fly   946 FGVV----LKGEAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAV 1006
            ||.:    |.|...|..::     |.:|.::.:...:.:|..:..:.....||||.|:|.|||..
 Frog   122 FGPIYRTKLNGPEDGKEKD-----VIIKRLRNSCGAQEIRDFLQRVAFQGWLGQHPNIVELLGCC 181

  Fly  1007 TKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGG 1071
            ..   ::...:::|....|::.:||                              ::..||    
 Frog   182 PN---EKPFCMVLENIEPGSLLHFL------------------------------WDCRRD---- 209

  Fly  1072 GLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVM 1136
                                                                             
 Frog   210 ----------------------------------------------------------------- 209

  Fly  1137 TTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAAR 1201
                    :||.:.:        ..|.||....|.      |.||...:.:|..:|:.|||||||
 Frog   210 --------VMSMDGI--------LYDLTECQVYTI------ALQVLSALGFLHQRKLFHGDLAAR 252

  Fly  1202 NILLCEDNVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWE 1266
            |||:..:...|:...|.|..|.:...:....  ..|:||:|.|.|.....|..|||||:||:|:|
 Frog   253 NILIHRNLTAKLTGLGGACEMRQTGTFPSRR--PAPLKWMAPERLLRLPISAKSDVWSFGILLYE 315

  Fly  1267 MFSLAKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEKRFAN 1331
            |.:|...|||.|.|| ::...|..|..|::|......:|.:|..||......||...||.||   
 Frog   316 MITLGAPPYPEIPPN-DILQHLQRGNIMKRPPTCKPAMYNVMKICWLWKAPERPSLPELRKR--- 376

  Fly  1332 MLGEDVASHYLDLNNPYMQSNIEYMKKQSTDYLALMGSPDELAPAAPRYVNGHIVPDIRIEELPD 1396
                                 :|..||.|.|...|. .|:::.|.....|.|  ...:|||   :
 Frog   377 ---------------------LESAKKASNDKTVLQ-VPEQVVPELYAGVAG--TEFMRIE---N 414

  Fly  1397 DY 1398
            ||
 Frog   415 DY 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845
IG_like 672..754 CDD:214653
Ig 674..739 CDD:143165
IGc2 779..840 CDD:197706 2/5 (40%)
PKc_like 927..1332 CDD:304357 93/409 (23%)
Pkinase_Tyr 935..1329 CDD:285015 89/398 (22%)
styk1NP_001123790.1 PTKc 118..378 CDD:270623 88/415 (21%)
STYKc 118..377 CDD:214568 88/414 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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