Sequence 1: | NP_001162911.1 | Gene: | Pvr / 34127 | FlyBaseID: | FBgn0032006 | Length: | 1577 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001096290.1 | Gene: | pdgfra / 100124862 | XenbaseID: | XB-GENE-6072920 | Length: | 1091 | Species: | Xenopus tropicalis |
Alignment Length: | 1535 | Identity: | 355/1535 - (23%) |
---|---|---|---|
Similarity: | 561/1535 - (36%) | Gaps: | 563/1535 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 ENGAPLMTPCKSAIILDAQTSTTLKCEDDEPMSWWTSQSQYVHVKS------FDNTEDPARPFGT 101
Fly 102 SLHLIEVTADYVAAYYCVKTSKFSQIAKEEQSDEAMIELVNQGYASSIYVYVNDPDTKLVDS--- 163
Fly 164 HNVVTARQYTDVVIPCKPAMPDTEVLLETSNGEMHSSKSVGR-YDPQRGFTIEIRSIVDGGDYYC 227
Fly 228 RPNPPFPHNEEEMTSIEVRFIATGLDIPRTQTTNMVYTYAPGVTDGDDEVLTVTNQSTGNLALIR 292
Fly 293 GGDGTLSRERARRSPARLAPMNASPSPRPGQDGKPLPKPVIRSSVEHHVFTDTNFTLDCEQSAYV 357
Fly 358 ESVYGMEWFTPSR---------DENRIFASQSRTDPKTRNSTHQTGRSTLTVLNAQPSDTGLYKC 413
Fly 414 VTTDNSNQNVQRATYRIKVLKQ------NESYLNVGEPSGHYNVQEYAN--RTIQMTANFEGFPT 470
Fly 471 PSFSWFKPDGTEVRQSENNFKILSTELST-------MLQVLNAQLQDSGTYVLRGSNSFGVVQRE 528
Fly 529 YNVSV-MDAPALKMSDAYVQVGSVARLECTVRSYPPAIVTFFFRPCSLEPQWPTCSVLNQNFSLP 592
Fly 593 SEQEKYQFQTRPRPGKLSVERIYEVSFLPTEPGILTCIAQNIIDGKERRTLTKAHVLLGNISENM 657
Fly 658 TIYGFDKDHKIAKEDNVNFTCEALAYHFDGNLKW---FINGEDLKESDSVHIETSHTKYSYKSTV 719
Fly 720 HITTISDRDRGTYECRAYHNDKDAVYSSREIDLYVHDPSAPQWTNGGQEGHSKIKRKLSQTLELE 784
Fly 785 CASTAVPVAIVRWFKDDKEVTESKLRHIIEKESKLLITHLYPGDEGVYKCVVENRLDRIERSFTV 849
Fly 850 VISDLPGISMAWVWFGVILFLILIGLCVFLAVRYQKEHKRHLALKAAGLANFEEGAVGHINPD-- 912
Fly 913 --LTLDEQAELLPYNREFEFPRENLKLGKQLGAGAFGVVLKGEAKGIRREEPTTTVAVKMVKATA 975
Fly 976 DNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFIN 1040
Fly 1041 QINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDN 1105
Fly 1106 DPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVP--EDDQIMSNNSVQ------PAWRSNYKT- 1161
Fly 1162 --------------DSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCEDNVVK 1212
Fly 1213 ICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPG 1277
Fly 1278 IDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEKRFANMLG-------E 1335
Fly 1336 DVASHYL------------DLNNPYM---QSNIEYMKKQSTDYLALMGSPDELAPAAPRYVNGHI 1385
Fly 1386 VPDIRIEELPDDYMEMSRDSDPDACTAIFSPTRLEGESSDFPDFSSETTFNFPGARQSPTLSNNL 1450
Fly 1451 NSGSSKPLRKKNGMPTVDVADQAPEEIPMLHRSSTGSDGS 1490 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pvr | NP_001162911.1 | IG | 346..432 | CDD:214652 | 21/94 (22%) |
Ig | <363..432 | CDD:299845 | 18/77 (23%) | ||
Ig | 466..533 | CDD:299845 | 18/73 (25%) | ||
IG_like | 672..754 | CDD:214653 | 9/84 (11%) | ||
Ig | 674..739 | CDD:143165 | 8/67 (12%) | ||
IGc2 | 779..840 | CDD:197706 | 8/60 (13%) | ||
PKc_like | 927..1332 | CDD:304357 | 164/427 (38%) | ||
Pkinase_Tyr | 935..1329 | CDD:285015 | 161/416 (39%) | ||
pdgfra | NP_001096290.1 | Ig_3 | 29..101 | CDD:404760 | 16/76 (21%) |
Ig | 215..313 | CDD:416386 | 31/163 (19%) | ||
Ig strand A | 215..219 | CDD:409353 | 1/3 (33%) | ||
Ig strand A' | 226..230 | CDD:409353 | 2/11 (18%) | ||
Ig strand B | 232..241 | CDD:409353 | 2/10 (20%) | ||
Ig strand C | 246..251 | CDD:409353 | 0/4 (0%) | ||
Ig strand C' | 254..256 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 260..268 | CDD:409353 | 1/7 (14%) | ||
Ig strand E | 272..280 | CDD:409353 | 3/13 (23%) | ||
Ig strand F | 290..296 | CDD:409353 | 2/13 (15%) | ||
Ig strand G | 301..307 | CDD:409353 | 2/5 (40%) | ||
Ig | 316..416 | CDD:416386 | 25/105 (24%) | ||
PTKc_PDGFR_alpha | 558..960 | CDD:173653 | 172/462 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 299 | 1.000 | Domainoid score | I1422 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D126783at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |