DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pvr and fgfr4

DIOPT Version :9

Sequence 1:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster
Sequence 2:NP_571505.1 Gene:fgfr4 / 100000160 ZFINID:ZDB-GENE-980526-488 Length:922 Species:Danio rerio


Alignment Length:1113 Identity:270/1113 - (24%)
Similarity:413/1113 - (37%) Gaps:457/1113 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 RIKVLKQNESYLNVGEPSGHYNVQEYANRTIQMTANFEGFPTPSFSWFK-------PDGTEVRQS 486
            |.|.::.:...|..|.|.   |........:::........:....|||       |||:.|..:
Zfish    28 RAKDIRVSRHILTPGYPE---NATVLVGGHVKLVCKLHQPASTRLQWFKKDSNRLGPDGSPVLTA 89

  Fly   487 -----ENNFKILSTELSTMLQVLNAQLQDSGTYVLRGSNSFGVVQREYNVSVM----DAPALKMS 542
                 ||..|:      .:..::|..|:|:|.||.:..||.|...|...|.|:    :.|..:.|
Zfish    90 LTPLLENLSKV------NIFPLVNISLEDAGEYVCKAENSAGQATRSAWVEVLSEVSEEPTEEPS 148

  Fly   543 D-AYVQVGSVARLECTVRSYPPAIVTFFFRPCSLEPQWPTCSVLNQNFSLPSEQEKYQFQTRPRP 606
            : ..:::|.|.:|.|...           ||.::  ||....|        ..|...:.|.|   
Zfish   149 EHLLLELGDVLKLRCDTN-----------RPGAV--QWFKSGV--------RVQHNARIQIR--- 189

  Fly   607 GKLSVERIYEVSFLPTEPGILTCIAQNIIDGKERRTLTKAHVLLGNISENMTIYGFDKDHKIAKE 671
              .:|..|.:|::  .:.|:..|:.:...:.....|:|.|.. :|:        |.|.|     |
Zfish   190 --AAVMEIADVTY--EDSGVYVCMLRGTKEALRNFTITVADA-VGS--------GDDDD-----E 236

  Fly   672 DNVNFTCEALAYHFDGNLKWFINGEDLKESDSVHIETSHTKYSYKSTVHITTISDRDRGTYECRA 736
            ||                          ..|.:..||                            
Zfish   237 DN--------------------------GLDDIGPET---------------------------- 247

  Fly   737 YHNDKDAVYSSREIDLYVHDPSAPQWTNGGQEGHSKIKRKL-----SQTLELECASTAVPVAIVR 796
               :.|.||.||          ||.||:     ..::::||     ..|::..|.:|..|:..:|
Zfish   248 ---ENDQVYISR----------APYWTH-----TQRMEKKLYAVPAGNTVKFRCPATGSPLPTIR 294

  Fly   797 WFKDDKE------VTESKLRHIIEKESKLLITHLYPGDEGVYKCVVENR---------LDRIERS 846
            |.|:.:|      :...||||   :...|::..:.|.|.|.|.|||||:         ||.:|||
Zfish   295 WLKNGREFRGEHRIGGIKLRH---QHWSLVMESVVPSDRGNYSCVVENKYGSIAHTYLLDVLERS 356

  Fly   847 ------------------------FTVVISD---------------------------------- 853
                                    ...|.||                                  
Zfish   357 PHRPILQAGLPKNTTAIVGGDAQFLCKVYSDAQPHIQWLKHIEMNGSRYGPDGIPYVKIVKTGSL 421

  Fly   854 ---------LPGISM--------------------AWV--------------------------- 862
                     |..|||                    ||:                           
Zfish   422 NMSEVEVLYLTNISMEDAGEYSCLAGNSIGFSHQSAWLTVLSEEDVAKEVDLMEAKYTDIIIYAS 486

  Fly   863 -WFGVILFLILIGLC---------VFLAVRYQKEHK----RHLALKA------------------ 895
             :..:::.::::.||         .|..:..||..|    |..::::                  
Zfish   487 GFLALVMAIVIVVLCRMQVHPSREPFDTLPVQKLSKFPLRRQYSVESNSSGKSSASLMRVARLSS 551

  Fly   896 ------AGLANFEEGAVGHINPDLTLDEQAELLPYNREFEFPRENLKLGKQLGAGAFGVVLKGEA 954
                  ||:..||                   |||:.::|||||||.|||.||.|.||.|::.||
Zfish   552 SCSPMLAGVMEFE-------------------LPYDPDWEFPRENLTLGKPLGEGCFGQVVRAEA 597

  Fly   955 KGIRRE--EPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMV 1017
            .||.:|  :...||||||:|..|.::.:..|:||:::|..:.:|.|::||||..|::   ..|.|
Zfish   598 YGINKENQDHMATVAVKMLKDDATDKDLADLISEMELMKVMDKHKNIINLLGVCTQD---GPLYV 659

  Fly  1018 IVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPI 1082
            :|||...|:::.:|...|                                               
Zfish   660 LVEYASKGSLREYLRARR----------------------------------------------- 677

  Fly  1083 HSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDDQIMS 1147
                         ||                      ...|::|         :|.|||:.    
Zfish   678 -------------PP----------------------GMDYTFD---------VTKVPEEQ---- 694

  Fly  1148 NNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLSSKKVLHGDLAARNILLCEDNVVK 1212
                                 :|..||:|.|:||||||:||:||:.:|.||||||:|:.||||:|
Zfish   695 ---------------------LTFKDLVSCAYQVARGMEYLASKRCIHRDLAARNVLVTEDNVMK 738

  Fly  1213 ICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTYSDVWSYGIVLWEMFSLAKVPYPG 1277
            |.||||||.:::.|.|||:.||::|:||:|.|:|.|.|::..|||||:|:::||:|:|...||||
Zfish   739 IADFGLARGVHQIDYYKKTTNGRMPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 803

  Fly  1278 IDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRPLFAELEKRFANMLGEDVASHYL 1342
            | |.:|||..|.:|:||:||.....|||..|.|||...|..||.|.:|.:....:| ..::..||
Zfish   804 I-PVEELFKLLKEGHRMDKPSNCTHELYMKMRECWHAVPTQRPTFKQLVEELDRVL-VSISDEYL 866

  Fly  1343 DLNNPYMQ 1350
            ||:.|:.|
Zfish   867 DLSTPFEQ 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PvrNP_001162911.1 IG 346..432 CDD:214652 1/2 (50%)
Ig <363..432 CDD:299845 1/2 (50%)
Ig 466..533 CDD:299845 21/78 (27%)
IG_like 672..754 CDD:214653 10/81 (12%)
Ig 674..739 CDD:143165 3/64 (5%)
IGc2 779..840 CDD:197706 22/75 (29%)
PKc_like 927..1332 CDD:304357 142/406 (35%)
Pkinase_Tyr 935..1329 CDD:285015 136/395 (34%)
fgfr4NP_571505.1 IG_like 44..135 CDD:214653 23/99 (23%)
Ig 52..136 CDD:299845 21/89 (24%)
IG_like 150..224 CDD:214653 18/101 (18%)
IGc2 156..212 CDD:197706 17/83 (20%)
Ig2_FGFR 268..352 CDD:143265 25/86 (29%)
IG_like 273..352 CDD:214653 23/81 (28%)
IG_like 367..461 CDD:214653 9/93 (10%)
Ig3_FGFR-2 375..462 CDD:143266 9/86 (10%)
PTKc_FGFR4 565..877 CDD:133230 152/431 (35%)
Pkinase_Tyr 578..854 CDD:285015 136/395 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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