DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx6 and Snx7

DIOPT Version :9

Sequence 1:NP_001245939.1 Gene:Snx6 / 34126 FlyBaseID:FBgn0032005 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_083931.2 Gene:Snx7 / 76561 MGIID:1923811 Length:445 Species:Mus musculus


Alignment Length:458 Identity:91/458 - (19%)
Similarity:163/458 - (35%) Gaps:152/458 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IASPTNPLATPPA-TGGAPAPSGATNGSGS----------------------ATSPDSSSSAPAT 65
            :||.::.||...: .||||.|||  :||.|                      |:..|.:|.:|..
Mouse     6 LASGSSELAVGESPRGGAPIPSG--SGSCSLLQADVLDLDEDEDDLEVFSKDASLMDMNSFSPMM 68

  Fly    66 PAVLGENALHVEISDALSEKEK-----------------VKFTVHTRTTLPGFSKKDNNVVRQHE 113
            |.........::..|....|:.                 :.:.:.|:|:...|...:..|.|:::
Mouse    69 PTSPLSMINQIKFEDGPDLKDLFITVDAPESHVTTIETFITYRIVTKTSRGEFDSSEFEVRRRYQ 133

  Fly   114 EFVWLHDRIEENDDYAGYIIPPCPPRPDFDASREKLQRLGEGEGNMTKEEF--KKMKSELEAEYL 176
            :|:||..::||  .:...||||.|                        |:|  |.|......:::
Mouse   134 DFLWLKGKLEE--AHPTLIIPPLP------------------------EKFIVKGMVERFNDDFI 172

  Fly   177 ATFKKTVAMHEVFLRRLASHPVFRVDQHLKVFLEYDQDLCAKPRKKMAIFGGFVKSLGKTTDEIL 241
            .|.:|  |:|: ||.|:|.||....::..||||....:..:..:|:..   |.:..:|:|...: 
Mouse   173 ETRRK--ALHK-FLNRIADHPTLTFNEDFKVFLTAQAEELSSYKKQGP---GLLSRMGQTVRAV- 230

  Fly   242 LSATVR----------DVNDFFENELQFLT--------------EYHGHLREA-------ALRTE 275
             ::::|          ::|:|.|...|.:.              :|...::|.       :...|
Mouse   231 -ASSMRGVKNRPEEFMEMNNFIETFSQKINLIDKISQRIYKEERDYFDEMKEYGPIHILWSASEE 294

  Fly   276 KMTQRHKDVGDSHQK-----------ISNAL---------------------TQLSTTEKGNVET 308
            ::....|.:....::           :|.||                     .|:.|.....||.
Mouse   295 ELVDTLKGMAGCIEQCCKATEKRMAGLSEALLPVVHEYVLYSEMLVGVMKRRDQIQTELDSKVEA 359

  Fly   309 FVAKTAEI---FERIKNLETRVASDQDLKLGDTLRYYQR--------DSDAAKALLIRRLRCLAA 362
            ...|.|:|   .|.|..||.:|....:....|..|:.|.        .:|.|:..:....:|||.
Mouse   360 LTYKKADIDLLTEEIGKLEDKVECANNALKADWERWKQNMKNDLRSAFTDTAEQNIRYYEQCLAT 424

  Fly   363 YEA 365
            :|:
Mouse   425 WES 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx6NP_001245939.1 PX_SNX5_like 72..212 CDD:132802 35/158 (22%)
BAR_SNX5_6 228..452 CDD:153305 36/212 (17%)
Snx7NP_083931.2 PX_SNX7 90..205 CDD:132817 33/143 (23%)
BAR_SNX7 189..431 CDD:153350 43/244 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.