Protein Alignment Snx6 and snx1b

DIOPT Version :9

• Sequence 1: NP_001245939.1
• Gene: Snx6 / 34126
• FlyBaseID: FBgn0032005
• Length: 455
• Species: Drosophila melanogaster
• Sequence 2: NP_001028907.1
• Gene: snx1b / 619253
• ZFINID: ZDB-GENE-050913-82
• Length: 524
• Species: Danio rerio
• Alignment Length: 510
• Identity: 102/510 - (20%)
• Similarity: 212/510 - (41%)
• Gaps: 105/510 - (20%)

  Fly     7 DSNLLNSPSTNNGA---TMEIASPTNPLATPPATGGAPAPSGA---------TNGSGSATSPD-- 57
            |:.:|:|...:.|.   |...:.||.|.:.|. .|...:..|:         |||..|....|
Zfish    23 DARVLDSDEEDEGEDIFTGARSKPTTPTSAPD-EGDIFSEEGSYIRSDVHHTTNGLHSDEELDLF 86

  Fly    58 ---------SSSSAPATPAVLGE-----NALHV--------------------------EISDAL 82
                     :::::.....::|.     |..||                          |::.|:
Zfish    87 TEATVELTLTNTTSQGRREIIGPTASACNTTHVPNSILKPSIVTKTMEELEEEESGDQFELNIAV 151

  Fly    83 SEKEKV--------KFTVHTRTTLPGFSKKDNNVVRQHEEFVWLHDRIEENDDYAGYIIPPCPPR 139
            :..||:        .:.|.|:||||.|:.|...|.|:..:|:.|::::...:...|.||||.|.:
Zfish   152 TNPEKIGDGMTAYMSYKVSTQTTLPMFANKTFTVRRRFSDFLGLYEKMSAKNSLMGCIIPPAPQK 216

  Fly   140 PDFDASREKLQRLGEGEGNMTKEEF-KKMKSELEAEYLATFKKTVAMHEVFLRRLASHPVFRVDQ 203
            .....::.|:     |:.:.:..|| :|.::.||.               :|:|:.:||....|.
Zfish   217 SVVGMTKVKV-----GKEDSSSAEFVEKRRAALER---------------YLQRVVAHPSLLQDP 261

  Fly   204 HLKVFLEYDQDLCAKPR--KKMAIFG-GFVKSLGKTTDEI-LLSATVRDVNDFFENELQFLTEYH 264
            .::.|||.|:    .||  ....:.| |.:|.:.:.:|.: .::..:.:.:::||::||.:....
Zfish   262 DVREFLERDE----LPRAVNTQTLSGPGLLKMINRASDAVNKMTIKINESDNWFESKLQEVENEE 322

  Fly   265 GHLREAALRTEKMTQRHKDVGDSHQKISNALTQLSTTEKGN-VETFVAKTAEIFERIKNLETRVA 328
            ..||......:.:....|::..:....|.::..|.:.|:.: :...:::.||:.::::.|..:.|
Zfish   323 QLLRRLHAAVDSLVNHRKELCINTAVFSKSVAMLGSVEENSALSRALSQLAEVEDKMEQLHQQQA 387

  Fly   329 SDQDLKLGDTLRYYQRDSDAAKALLIRRLRCLAAYEAANRNLEKARSKNKDV---HAPLEVQEA- 389
            ......|.:.|..|.|...|.:....:|::.....:.|...|:|.|.....:   :.|.::|:|
Zfish   388 FSDFFILAELLADYVRLLGAVRCCFEQRMKVWQRLQEAQITLQKKREAEAKLLWANKPEKLQQAK 452

  Fly   390 ------ETAQAEACEKFESMSACGKEELIGFRNRRVAAFKKSLVELSE--LEIKH 436
                  |:..::....||.::...::|::.|...:...||:.:|:..|  |..:|
Zfish   453 DDINEWESKVSQYERDFERVTCTVRKEVLRFEKEKARDFKQHIVKYLESLLHTQH 507

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snx6	NP_001245939.1	PX_SNX5_like	72..212	CDD:132802	40/174 (23%)
		BAR_SNX5_6	228..452	CDD:153305	41/223 (18%)
snx1b	NP_001028907.1	Sorting_nexin	43..122	CDD:281663	15/79 (19%)
		PX_domain	147..270	CDD:295365	36/142 (25%)
		BAR	288..521	CDD:299863	40/220 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910