Protein Alignment Snx6 and lcp1

DIOPT Version :9

• Sequence 1: NP_001245939.1
• Gene: Snx6 / 34126
• FlyBaseID: FBgn0032005
• Length: 455
• Species: Drosophila melanogaster
• Sequence 2: NP_001015721.1
• Gene: lcp1 / 548438
• XenbaseID: XB-GENE-962206
• Length: 627
• Species: Xenopus tropicalis
• Alignment Length: 259
• Identity: 54/259 - (20%)
• Similarity: 86/259 - (33%)
• Gaps: 86/259 - (33%)

  Fly    60 SSAPATPAVLGENALHVEISDAL---SEKEKVKFTVH-TRTTLPGFSKKDNNVVRQHEEFVWLHD 120
            :|....|.|   |.|:.::||||   ...||:|..|. .|...|.:||...|:.:
 Frog   406 NSLGVNPRV---NHLYSDLSDALVIFQLYEKIKVPVDWNRVNKPPYSKLGENMKK---------- 457

  Fly   121 RIEENDDYAGYIIPPCPPRPDFDASREKLQRLGEG-----EGNMTKEEFKKMKSELEAEYLATFK 180
              .||.:||          .|...::.|...:|..     |||.|
 Frog   458 --IENCNYA----------VDLGKNKAKFSLVGIAGQDLKEGNHT-------------------- 490

  Fly   181 KTVAMHEVFLRRLASHPVFRVDQHLKVFLEYDQDLCA------KPRKKMAIFGGFVKSLGKTTDE 239
            .|:|:....:||...:.:..:....||   .|:.:..      |..:|.:....|      ...:
 Frog   491 LTLALLWQLMRRYTLNILEDIGGGQKV---NDETILTWVNETLKEAEKCSSISSF------KDPK 546

  Fly   240 ILLSATVRDVNDFFENELQFLTEYHGHLREAALRTEKMTQRHKDVGDSHQKISNALTQLSTTEK 303
            |..|..|.|:.|..:         .|.:....|:||.:        |..:|::||...:|...|
 Frog   547 ISTSMPVLDLIDAIQ---------PGCINYDLLKTEDL--------DETEKLNNAKYAISMARK 593

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snx6	NP_001245939.1	PX_SNX5_like	72..212	CDD:132802	32/148 (22%)
		BAR_SNX5_6	228..452	CDD:153305	16/76 (21%)
lcp1	NP_001015721.1	SAC6	19..621	CDD:227401	54/259 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C165173196
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930