DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx6 and snx11

DIOPT Version :9

Sequence 1:NP_001245939.1 Gene:Snx6 / 34126 FlyBaseID:FBgn0032005 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_021335737.1 Gene:snx11 / 492678 ZFINID:ZDB-GENE-041111-253 Length:579 Species:Danio rerio


Alignment Length:353 Identity:68/353 - (19%)
Similarity:125/353 - (35%) Gaps:103/353 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 VEISDALSEKE-----KVKFTVHTRTTLPGFSKKDNNVVRQHEEFVWLHDRIEENDDYAGYIIPP 135
            |.:.|...:.|     .|.|.:...|....|:.|.:.|.|::.||.||..::::|   ||.:  |
Zfish    86 VRVQDPRVQNEGSWNSYVDFKIFLHTNSKAFTAKTSCVRRRYSEFAWLKKKLQKN---AGLV--P 145

  Fly   136 CPPRPDFDASREKLQRLGEGEGNMTKEEFKKMKSELEAEYLATFKKTVAMHEVFLRRLASHPVFR 200
            .|..|.                       |.:.|.:..:::...:|.:   :.||.::....|..
Zfish   146 VPELPK-----------------------KSIFSFINDDFIERRRKGL---QGFLDKVLHMTVCL 184

  Fly   201 VDQHLKVFLE------YDQDLCAKPRKKMAIF----------GGFVKSLGKTTDEILLSATVRDV 249
            .|..|.:||:      :.:| |........:.          .|:|:..| ..|:.|.|.||.  
Zfish   185 SDSQLHLFLQTQLPVKHIED-CVHGHTPYTVTEAILSYASSNRGWVQEEG-GADQELCSTTVS-- 245

  Fly   250 NDFFE-----------------------NELQFLTEYH-GHLREAALRTEKMTQRHKDVGDSHQK 290
               :|                       |||...:|.. ....:.||:|:     |:.:.:..|.
Zfish   246 ---YESVESPVPHLPSLQSPGALSSGPPNELTDASELRLSDTEQTALKTD-----HEHLPEEKQS 302

  Fly   291 ISNALTQLSTTEKGNVETFVAKTAEIFERIKNLETRVASDQDLKLGDTLRY---YQRDSDAAKAL 352
            ....:.::....:|:|||....|           |..:.|.::.:.|| :|   |..:|.|.:..
Zfish   303 YIKLVVEVHPNLQGSVETEEDST-----------TTESEDAEILVKDT-KYPQTYNCESPAPQID 355

  Fly   353 LIRRLRCLAAYEAANRNLEKARSKNKDV 380
            .....:.|...:.:..||::..|..:|:
Zfish   356 GSLEDKPLQREKPSKNNLDQEPSFGEDL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx6NP_001245939.1 PX_SNX5_like 72..212 CDD:132802 30/146 (21%)
BAR_SNX5_6 228..452 CDD:153305 36/180 (20%)
snx11XP_021335737.1 PX_SNX10 86..196 CDD:132808 30/140 (21%)
DnaJ <374..>502 CDD:333066 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590412
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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