DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx6 and snx5

DIOPT Version :9

Sequence 1:NP_001245939.1 Gene:Snx6 / 34126 FlyBaseID:FBgn0032005 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_999934.1 Gene:snx5 / 406797 ZFINID:ZDB-GENE-040426-2857 Length:399 Species:Danio rerio


Alignment Length:403 Identity:203/403 - (50%)
Similarity:278/403 - (68%) Gaps:9/403 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SATSPDSSSSAPATPAV-LGENA-LHVEISDALSEKEKVKFTVHTRTTLPGFSKKDNNVVRQHEE 114
            ::.|.||......:.:| |..:| |.::|.|||.|::||||||||:|||..|.|.|.:|.||||:
Zfish     2 TSISEDSDKEKARSVSVDLNNDASLLIDIPDALCERDKVKFTVHTKTTLSPFQKPDFSVPRQHED 66

  Fly   115 FVWLHDRIEENDDYAGYIIPPCPPRPDFDASREKLQRLGEGEGNMTKEEFKKMKSELEAEYLATF 179
            |:||||.|.|.::|||.||||.||:|||:..|||:.:|||||.:|||||:.|||.||||||||.|
Zfish    67 FIWLHDAIVETEEYAGLIIPPAPPKPDFEGPREKMHKLGEGESSMTKEEYAKMKQELEAEYLAVF 131

  Fly   180 KKTVAMHEVFLRRLASHPVFRVDQHLKVFLEYDQDLCAKPRKKMAIFGGFVKSLGKTTDEILLSA 244
            ||||.:|||||:||:|||.|..|::..:||||||||..:.:....:||||.|::.||.||:|:|.
Zfish   132 KKTVQVHEVFLQRLSSHPSFSKDRNFHIFLEYDQDLSVRRKNAKEMFGGFFKNMVKTADEVLISG 196

  Fly   245 TVRDVNDFFENELQFLTEYHGHLREAALRTEKMTQRHKDVGDSHQKISNALTQLSTTEKGNVETF 309
             |::|::|||.|..||.:|...::::..:.||||:.||:|.|.:..||.||..::.......:..
Zfish   197 -VKEVDEFFEQEKIFLLDYSNKIKDSTAKAEKMTRSHKNVADDYNHISGALNSVAADNNSAFKKH 260

  Fly   310 VAKTAEIFERIKNLETRVASDQDLKLGDTLRYYQRDSDAAKALLIRRLRCLAAYEAANRNLEKAR 374
            :.|..|:||:::.:|.||||||:|||.:.||||.||..|||.||.||.|.||.||.:|:.|:|||
Zfish   261 LEKCVEVFEKLRKVEDRVASDQELKLTELLRYYTRDIQAAKDLLYRRARALADYENSNKALDKAR 325

  Fly   375 SKNKDVHAPLEVQEAETAQAEACEKFESMSACGKEELIGFRNRRVAAFKKSLVELSELEIKHAKT 439
            .|.||      |.:||..|.:..:||:.:|..||:||..|:.|||.||:|:|:|::||||||||.
Zfish   326 LKGKD------VPQAEENQKQCLQKFDRLSESGKKELTSFKARRVVAFRKNLIEMTELEIKHAKN 384

  Fly   440 QYEYLRQSLLALK 452
            ....|:.|:..||
Zfish   385 SMSTLQGSIELLK 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx6NP_001245939.1 PX_SNX5_like 72..212 CDD:132802 89/140 (64%)
BAR_SNX5_6 228..452 CDD:153305 100/223 (45%)
snx5NP_999934.1 PX_domain 24..164 CDD:295365 89/139 (64%)
BAR 180..397 CDD:299863 100/223 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590411
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1660
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 420 1.000 Inparanoid score I1771
OMA 1 1.010 - - QHG52498
OrthoDB 1 1.010 - - D1009572at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26474
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR45850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1564
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.870

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