DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx6 and snx6

DIOPT Version :9

Sequence 1:NP_001245939.1 Gene:Snx6 / 34126 FlyBaseID:FBgn0032005 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_988999.1 Gene:snx6 / 394595 XenbaseID:XB-GENE-943801 Length:406 Species:Xenopus tropicalis


Alignment Length:406 Identity:216/406 - (53%)
Similarity:291/406 - (71%) Gaps:13/406 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GSATSPDSSSSAPATPAVLG-----ENALHVEISDALSEKEKVKFTVHTRTTLPGFSKKDNNVVR 110
            |....||..|.....|..:.     :..|.|:|||||||::||||||||:::||.|.:.:.:|||
 Frog     4 GLDDGPDFLSEEDRAPRAINVDLQPDATLQVDISDALSERDKVKFTVHTKSSLPNFKQNEFSVVR 68

  Fly   111 QHEEFVWLHDRIEENDDYAGYIIPPCPPRPDFDASREKLQRLGEGEGNMTKEEFKKMKSELEAEY 175
            |||||:||||...||::||||||||.||||||||||||||:||||||:||||||.|||.||||||
 Frog    69 QHEEFIWLHDSFVENEEYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTKEEFTKMKQELEAEY 133

  Fly   176 LATFKKTVAMHEVFLRRLASHPVFRVDQHLKVFLEYDQDLCAKPRKKMAIFGGFVKSLGKTTDEI 240
            ||.||||||||||||.|:|:||:.|.|.:..|||||:|||..:.:.|......|.||:.|:.|.:
 Frog   134 LAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSVRGKNKKEKLEDFFKSVVKSADGV 198

  Fly   241 LLSATVRDVNDFFENELQFLTEYHGHLREAALRTEKMTQRHKDVGDSHQKISNALTQLSTTEKGN 305
            ::|.| :||:|||::|..||.|||..:::|:.:::|||:.||:..|.:.:|.:::..|.|.:..:
 Frog   199 IVSGT-KDVDDFFDHERTFLVEYHNRVKDASAKSDKMTRSHKNAADDYNRIGSSMYTLGTQDNSD 262

  Fly   306 VETFVAKTAEIFERIKNLETRVASDQDLKLGDTLRYYQRDSDAAKALLIRRLRCLAAYEAANRNL 370
            :..|..:.:|:|::.:.:|.|||:|:||||.|.|:||.|:|.|||.||.||.|.|..||.||:.|
 Frog   263 ICKFFLRVSELFDKTRKIEARVAADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKAL 327

  Fly   371 EKARSKNKDVHAPLEVQEAETAQAEACEKFESMSACGKEELIGFRNRRVAAFKKSLVELSELEIK 435
            :|||:|||||.|      |||.|..:|:|||.:|...|:||:.|:.||||||:|:||||:|||:|
 Frog   328 DKARAKNKDVLA------AETTQQLSCQKFEKISESAKQELMDFKTRRVAAFRKNLVELAELELK 386

  Fly   436 HAKTQYEYLRQSLLAL 451
            |||...:.| ||.||:
 Frog   387 HAKGNLQLL-QSCLAV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx6NP_001245939.1 PX_SNX5_like 72..212 CDD:132802 101/139 (73%)
BAR_SNX5_6 228..452 CDD:153305 105/224 (47%)
snx6NP_988999.1 PX_SNX6 30..170 CDD:132825 101/139 (73%)
BAR 186..403 CDD:325158 105/224 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 218 1.000 Domainoid score I2609
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12304
Inparanoid 1 1.050 425 1.000 Inparanoid score I1729
OMA 1 1.010 - - QHG52498
OrthoDB 1 1.010 - - D1009572at2759
OrthoFinder 1 1.000 - - FOG0004890
OrthoInspector 1 1.000 - - otm48651
Panther 1 1.100 - - O PTHR45850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3071
SonicParanoid 1 1.000 - - X1564
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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