DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx6 and Snx32

DIOPT Version :9

Sequence 1:NP_001245939.1 Gene:Snx6 / 34126 FlyBaseID:FBgn0032005 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_006231002.1 Gene:Snx32 / 361708 RGDID:1560591 Length:502 Species:Rattus norvegicus


Alignment Length:374 Identity:190/374 - (50%)
Similarity:263/374 - (70%) Gaps:17/374 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SGSATSPDSSSSAPATPAVLGENALHVEISDALSEKEKVKFTVHTRTTLPGFSKKDNNVVRQHEE 114
            :|..:.|.|:|     ..:.|::.|.||||||:||::||||||.|::.||.|::.:.:|||||||
  Rat    15 AGKESKPSSTS-----VDLQGDSPLQVEISDAVSERDKVKFTVQTKSGLPHFAQPEFSVVRQHEE 74

  Fly   115 FVWLHDRIEENDDYAGYIIPPCPPRPDFDASREKLQRLGEGEGNMTKEEFKKMKSELEAEYLATF 179
            |:||||...||::|||.||||.||||||:|||||||:||||..::|:|||.:||.||||||||.|
  Rat    75 FIWLHDTYVENEEYAGLIIPPAPPRPDFEASREKLQKLGEGNSSITREEFARMKQELEAEYLAIF 139

  Fly   180 KKTVAMHEVFLRRLASHPVFRVDQHLKVFLEYDQDLCAKPRKKMAIFGGFVKSLGKTTDEILLS- 243
            ||||||||:||:|||:||..|.|.:|.|||||.|||..:.:.:..:.|||:||:.::.||:|:: 
  Rat   140 KKTVAMHEIFLQRLAAHPTLRRDHNLSVFLEYSQDLSVREKNRKEVLGGFLKSIVRSADEVLITG 204

  Fly   244 -ATVRDVNDFFENELQFLTEYHGHLREAALRTEKMTQRHKDVGDSHQKISNALTQLSTTEKGNVE 307
             :.:::|:||||:|..||.|||..:|:...|.:::...||.:.|::..:|.||:.|.|.....::
  Rat   205 ISGLKEVDDFFEHERTFLVEYHTRIRDTCQRADRVMHSHKCLADNYIPLSAALSSLGTQAVNQLK 269

  Fly   308 TFVAKTAEIFERIKNLETRVASDQDLKLGDTLRYYQRDSDAAKALLIRRLRCLAAYEAANRNLEK 372
            ....|.||:|||::.||.|:|||:||||.|.||||.|||.|||.||.||||.||.||.||:.|:|
  Rat   270 RSFLKLAELFERLRKLEGRIASDEDLKLSDMLRYYMRDSQAAKDLLYRRLRALADYENANKALDK 334

  Fly   373 ARSKNKDVHAPLEVQEAETAQAEACEKFESMSACGKEELIGFRNRRVAA 421
            ||::|:      |||.||:.|...|::||.:|...|..    ..||:|:
  Rat   335 ARTRNR------EVQPAESHQQLCCQRFERLSDSAKRG----EPRRLAS 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx6NP_001245939.1 PX_SNX5_like 72..212 CDD:132802 94/139 (68%)
BAR_SNX5_6 228..452 CDD:153305 86/196 (44%)
Snx32XP_006231002.1 PX_SNX5_like 34..171 CDD:132802 93/136 (68%)
BAR_SNX5_6 188..>364 CDD:153305 82/181 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349182
Domainoid 1 1.000 220 1.000 Domainoid score I2532
eggNOG 1 0.900 - - E1_KOG1660
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 425 1.000 Inparanoid score I1699
OMA 1 1.010 - - QHG52498
OrthoDB 1 1.010 - - D1009572at2759
OrthoFinder 1 1.000 - - FOG0004890
OrthoInspector 1 1.000 - - otm45553
orthoMCL 1 0.900 - - OOG6_105967
Panther 1 1.100 - - O PTHR45850
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1564
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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