Protein Alignment Snx6 and Snx4

DIOPT Version :9

• Sequence 1: NP_001245939.1
• Gene: Snx6 / 34126
• FlyBaseID: FBgn0032005
• Length: 455
• Species: Drosophila melanogaster
• Sequence 2: NP_001121022.1
• Gene: Snx4 / 360725
• RGDID: 1309763
• Length: 450
• Species: Rattus norvegicus
• Alignment Length: 489
• Identity: 106/489 - (21%)
• Similarity: 180/489 - (36%)
• Gaps: 154/489 - (31%)

  Fly    26 SPTNPLATPPATGGAPAPSGATNGSGSATSPDSSSSAPATPAVLGENALHVEISDALSEKEK--- 87
            :|..||..|.|...| |....|.|    |..|.|.:...|    |.|....:|..::||.||
  Rat    15 APLEPLGGPGAVLEA-AVGEETEG----TREDVSGADTMT----GNNFWLKKIEISVSEAEKRTG 70

  Fly    88 ----------VKFTVHTRTT--LPGFSKKDNNVVRQHEEFVWLHDRIEENDDYAGYIIPPCPPR- 139
                      ..:.:.||:.  ..|.|...:::.|::.||..|.:.:...  |...::||.|.:
  Rat    71 RNAMNMQETYTAYLIETRSVEHADGQSVLTDSLWRRYSEFELLRNYLLVY--YPHVVVPPLPEKR 133

  Fly   140 --------------PDFDASREKLQRLG------------------------EGEGNMTKEEFKK 166
                          |||...|    |:|                        ..|||. ||...:
  Rat   134 AEFVWHKLSADNMDPDFVERR----RIGLENFLLRVASHPVLCRDKIFYLFLTQEGNW-KETVNE 193

  Fly   167 MKSELEAE-----YLATFK------------------KTVAMHEVFLR-RLAS--HPVFRV-DQH 204
            ...:|:|:     ..|||:                  ::|..|.:.:| |:|.  :.|::| ..:
  Rat   194 TGFQLKADSRLKALNATFRVKNPDKRFTELRQYSDELQSVISHLLRIRARVADRLYGVYKVHGNY 258

  Fly   205 LKVFLEYDQDLCAKPRKKMAIFGGFVKSLGKTTDEILLSATVRDVNDFFENELQF---LTEY--H 264
            .:||.|:     :...|:|   |..::|.|...|....|     ::|..|:|..:   |.||  :
  Rat   259 GRVFSEW-----SAIEKEM---GDGLQSAGHHMDVYASS-----IDDILEDEEHYADQLKEYLFY 310

  Fly   265 GHLREAALRTEKMTQRHKDVGDSHQKISNALTQLSTTEKGNVETFVAKTAEIFERIKNLETRVAS 329
            .....|..|..::.|  .|:..:.|.:::...|......|.|.||         .:|.:.|::..
  Rat   311 AEALRAVCRKHELMQ--YDLETAAQDLASKKQQCEELATGTVRTF---------SLKGMTTKLFG 364

  Fly   330 DQDLKLGDTLRYYQRDSDAAKALLIRRLRCLAAYEAANRNLEKARSKNKDVHAPLEVQE-AETAQ 393
            .:..:        ||::         |::.|.  |..|...::.:|||      ||.:| .:.|.
  Rat   365 QETPE--------QREA---------RIKVLE--EQINEGEQQLKSKN------LEGREFVKNAW 404

  Fly   394 AEACEKF-ESMSACGKEELIGFRNRRVAAFKKSL 426
            |: .|:| |..:...||.||.:...:::..||.:
  Rat   405 AD-IERFKEQKNRDLKEALISYAVMQISMCKKGI 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snx6	NP_001245939.1	PX_SNX5_like	72..212	CDD:132802	44/220 (20%)
		BAR_SNX5_6	228..452	CDD:153305	45/206 (22%)
Snx4	NP_001121022.1	PX_SNX4	58..184	CDD:132774	23/131 (18%)
		BAR_SNX4	205..448	CDD:153306	61/283 (22%)
		Med21	<324..398	CDD:288119	21/109 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910