Protein Alignment Snx6 and snx1a

DIOPT Version :9

• Sequence 1: NP_001245939.1
• Gene: Snx6 / 34126
• FlyBaseID: FBgn0032005
• Length: 455
• Species: Drosophila melanogaster
• Sequence 2: NP_001122143.2
• Gene: snx1a / 337386
• ZFINID: ZDB-GENE-060302-3
• Length: 659
• Species: Danio rerio
• Alignment Length: 492
• Identity: 112/492 - (22%)
• Similarity: 212/492 - (43%)
• Gaps: 91/492 - (18%)

  Fly    28 TNPLATPPATGGAPAPSGATNGSGS--------AT----------------SPDSSSSAPATPAV 68
            |....||||:  .||.:..|||..|        ||                |.:.|.||||.|..
Zfish   195 TEEALTPPAS--KPAANTRTNGVHSEEQDLFSEATVELSLDSPHNDRKKKDSVNPSVSAPAAPVA 257

  Fly    69 LG---------------ENALHVEISDALSEKEKV--------KFTVHTRTTLPGFSKKDNNVVR 110
            ..               |:....:::.:::..|||        .:.|.|:|:|..|..|...|.|
Zfish   258 SSSSKPPSKTLEELEEEESEDKFDLNVSITNPEKVGDGMNAYMVYKVSTQTSLSMFRSKTFTVRR 322

  Fly   111 QHEEFVWLHDRIEENDDYAGYIIPPCPPRPDFDASREKLQRLGEGEGNMTKEEF-KKMKSELEAE 174
            :..:|:.|::::.|.....|||:||.|.:.....::.|:     |:.:.:..|| ::.::.||.
Zfish   323 RFSDFLGLYEKLSEKHSQNGYIVPPPPEKSIMGMTKVKV-----GKEDPSSAEFVERRRAALER- 381

  Fly   175 YLATFKKTVAMHEVFLRRLASHPVFRVDQHLKVFLEYDQDLCAKPR--KKMAIFG-GFVKSLGKT 236
                          :|:|:.|||....|..::.|||.::    .||  ....:.| ||:|.|.|.
Zfish   382 --------------YLQRVVSHPSLLQDPDVREFLEKEE----LPRAVSTQTLSGAGFLKMLNKA 428

  Fly   237 TDEI-LLSATVRDVNDFFENELQFLTEYHGHLREAALRTEKMTQRHKDVGDSHQKISNALTQLST 300
            ||.: .::..:.:.:.:|:.::|.:......||:..:..|.:....|::..:....:.::..|.:
Zfish   429 TDAVSKMTIKMNEQDVWFDEKIQDVENEEQLLRKLHVMVESLVNHRKELSGNTAAFAKSVAMLGS 493

  Fly   301 TEKGN-VETFVAKTAEIFERIKNLETRVASDQDLKLGDTLRYYQRDSDAAKALLIRRLRCLAAYE 364
            :|... :...:::.||:.:||:.|....|::......:.|..|.|...|.:....:|::....::
Zfish   494 SEDNTALSRALSQLAEVEDRIEQLHRDQAANDFFTFAELLADYIRLLGAVRGCFDQRMKAWQRWQ 558

  Fly   365 AANRNLEKARSKNKDV---HAPLEVQEA--ETAQAEAC-----EKFESMSACGKEELIGFRNRRV 419
            .|...|:|.|.....:   :.|.::|:|  |.|:.||.     ..||.:||..::::|.|...:.
Zfish   559 DAESMLQKKREAEAKLLWANKPDKLQQAKDEIAEWEAKVTQYERDFERISATVQKDVIRFDKEKA 623

  Fly   420 AAFKKSLVELSELEIKHAKTQ-YEYLRQSLLALKEIA 455
            ..||:.:::..| .:.|::.| .:|....|...|.||
Zfish   624 RDFKRQIIKYLE-SLLHSQQQLIKYWEAFLPEAKAIA 659

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snx6	NP_001245939.1	PX_SNX5_like	72..212	CDD:132802	35/148 (24%)
		BAR_SNX5_6	228..452	CDD:153305	50/236 (21%)
snx1a	NP_001122143.2	Sorting_nexin	180..256	CDD:281663	19/62 (31%)
		PX_SNX1	282..405	CDD:132814	35/142 (25%)
		BAR_SNX1	423..656	CDD:153349	48/233 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910