DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx6 and SNX33

DIOPT Version :9

Sequence 1:NP_001245939.1 Gene:Snx6 / 34126 FlyBaseID:FBgn0032005 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_695003.1 Gene:SNX33 / 257364 HGNCID:28468 Length:574 Species:Homo sapiens


Alignment Length:362 Identity:72/362 - (19%)
Similarity:130/362 - (35%) Gaps:79/362 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 VVRQHEEFVWLHDRIEENDDYAGYIIPPCPPRPDFDASREKLQRLGEGEGNMTKEEFKKMKSELE 172
            |.|:::.|.||::|:...     :.:...|..|:..|:           |...::..:|.|..| 
Human   263 VYRRYKHFDWLYNRLLHK-----FTVISVPHLPEKQAT-----------GRFEEDFIEKRKRRL- 310

  Fly   173 AEYLATFKKTVAMHEVFLRRLASHPVFRVDQHLKVFLEYDQDLCAKPRKKMAIFGGFVKSLGKTT 237
                          .:::..:.||||....:..:.||....|...|..|:.|           ..
Human   311 --------------ILWMDHMTSHPVLSQYEGFQHFLSCLDDKQWKMGKRRA-----------EK 350

  Fly   238 DEILLSATVRDVNDFFENELQFLTEYHGHLREAALRTEKMTQRHKDVGDSHQKISNALTQLSTTE 302
            ||:        |...|....|..|| |..|::...|.:......|.:.||..::|...::|....
Human   351 DEM--------VGASFLLTFQIPTE-HQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKH 406

  Fly   303 KGNVETFVAKTAEIFERIKN---LETRVASDQ-DLKLGDTLRYY----QRDSDAAKALLIRRLRC 359
            .|.......|....|:.|.:   ::....|:. :..:..|.|.|    :..::..|..|.:.|..
Human   407 VGGFRKEFQKLGSAFQAISHSFQMDPPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDT 471

  Fly   360 LAAYEAANRNLEKARSKNKDVHAPLEVQEAETAQAEACEKFESMSACGKEELIGFRNR-RVAAFK 423
            |:.|:....|.       .|:   :.:|:...|:.:..::........::|..|.|.| ||..|.
Human   472 LSLYQGLLSNF-------PDI---IHLQKGAFAKVKESQRMSDEGRMVQDEADGIRRRCRVVGFA 526

  Fly   424 KSLVELS------ELEIKHAKTQYEYLRQSLLALKEI 454
            .. .|::      ||:.||  ....||||.:|..:.:
Human   527 LQ-AEMNHFHQRRELDFKH--MMQNYLRQQILFYQRV 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx6NP_001245939.1 PX_SNX5_like 72..212 CDD:132802 19/103 (18%)
BAR_SNX5_6 228..452 CDD:153305 49/238 (21%)
SNX33NP_695003.1 SH3_SNX33 4..58 CDD:212829
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..119
PX_domain 230..354 CDD:295365 25/140 (18%)
BAR_SNX33 365..571 CDD:153353 44/210 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155292
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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