DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx6 and snx-6

DIOPT Version :9

Sequence 1:NP_001245939.1 Gene:Snx6 / 34126 FlyBaseID:FBgn0032005 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001256763.1 Gene:snx-6 / 190399 WormBaseID:WBGene00013354 Length:478 Species:Caenorhabditis elegans


Alignment Length:384 Identity:197/384 - (51%)
Similarity:278/384 - (72%) Gaps:11/384 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 ENALHVEISDALSEKEKVKFTVHTRTTLPGFSKKDNNVVRQHEEFVWLHDRIEENDDYAGYIIPP 135
            :.|:.|:|||||||:||||:||||||.|... |.:..|||:||||:|||..:|:|::|||:||||
 Worm   101 DEAICVDISDALSEREKVKYTVHTRTRLQEM-KPETAVVREHEEFLWLHGTLEDNENYAGFIIPP 164

  Fly   136 CPPRPDFDASREKLQRLGEGEGNMTKEEFKKMKSELEAEYLATFKKTVAMHEVFLRRLASHPVFR 200
            .||:|:||:||||||:|||||..||||||.|||.:||.:|||.||||||||||||:|:|:||||:
 Worm   165 APPKPNFDSSREKLQKLGEGEATMTKEEFLKMKHDLEQDYLAQFKKTVAMHEVFLQRIAAHPVFK 229

  Fly   201 VDQHLKVFLEYDQDLCAKPRKKMAIFGGFVKSLGKTTDEILLSATVRDVNDFFENELQFLTEYHG 265
            .||:.::||:|:.:|..:.:.|......|.|...::.||:|||.. :||::|||.|..::.||:.
 Worm   230 NDQNFRIFLQYENELSVRGKNKKEQVESFWKRFTQSADEVLLSGQ-KDVDEFFEKEKNYMVEYNI 293

  Fly   266 HLREAALRTEKMTQRHKDVGDSHQKISNALTQLSTTE--KGNVETFVAKTAEIFERIKNLETRVA 328
            |::|||.::||:....|:|..|..||.::..:::..|  |....|| |:.|:...::|.:|:|.:
 Worm   294 HIKEAAAKSEKLIAARKNVVASFSKIGDSFERIARGEPNKSLARTF-AQGADAMFKLKKVESRSS 357

  Fly   329 SDQDLKLGDTLRYYQRDSDAAKALLIRRLRCLAAYEAANRNLEKARSKNKDVHAPLEVQEAETAQ 393
            :|::|||||||.|:.||:.|||.||.||:||||.|||||:|||:||:||:      |:.:||..|
 Worm   358 NDEELKLGDTLHYFARDTQAAKDLLYRRMRCLANYEAANKNLERARAKNR------EIPKAEAEQ 416

  Fly   394 AEACEKFESMSACGKEELIGFRNRRVAAFKKSLVELSELEIKHAKTQYEYLRQSLLALK 452
            :|||:|||.::...|.||...:.|||.||||:|.:|:||||||:|.:...||..:..||
 Worm   417 SEACKKFEEITGLSKNELKELKTRRVQAFKKNLTDLAELEIKHSKAEISLLRDVVERLK 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx6NP_001245939.1 PX_SNX5_like 72..212 CDD:132802 92/139 (66%)
BAR_SNX5_6 228..452 CDD:153305 100/225 (44%)
snx-6NP_001256763.1 PX_SNX5_like 102..241 CDD:132802 92/139 (66%)
BAR_SNX5_6 257..475 CDD:153305 100/225 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166270
Domainoid 1 1.000 198 1.000 Domainoid score I1803
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12304
Inparanoid 1 1.050 384 1.000 Inparanoid score I1172
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52498
OrthoDB 1 1.010 - - D1009572at2759
OrthoFinder 1 1.000 - - FOG0004890
OrthoInspector 1 1.000 - - oto17900
orthoMCL 1 0.900 - - OOG6_105967
Panther 1 1.100 - - LDO PTHR45850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3071
SonicParanoid 1 1.000 - - X1564
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.940

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