DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8372 and RTE1

DIOPT Version :10

Sequence 1:NP_723362.1 Gene:CG8372 / 34121 FlyBaseID:FBgn0032000 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001324625.1 Gene:RTE1 / 817148 AraportID:AT2G26070 Length:288 Species:Arabidopsis thaliana


Alignment Length:216 Identity:67/216 - (31%)
Similarity:104/216 - (48%) Gaps:57/216 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LPPINVKDQRFPYCIVWTPIPVLTWLMPMIGHMGICTSSGVIRDFAGPYFVSEDNMAFGRPTRYI 98
            ||.|:.|..:||.||||||:||::||.|.|||:|:|...|||.||||..|::.|:.|||.|.||:
plant    41 LPEIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPARYL 105

  Fly    99 RLH--------------------------------------------PKHM-------------V 106
            :|.                                            |.:|             .
plant   106 QLDRTKVLVSASLLSRIWLCMDFVSFVSNYKNFLIFIKCVCLWQCCLPPNMGGHTCKYGFKHTDF 170

  Fly   107 GGSYAWDEAVSKASVLYGTRIHNIFCDNCHSHVATALIYMRYYDSTAWNMIILSMWLFVCGRYVG 171
            |.:..||.|:|.::..:..:.:|||..||||.||..|..:.|..|..|||:.:::.|.:.|:::.
plant   171 GTARTWDNALSSSTRSFEHKTYNIFTCNCHSFVANCLNRLCYGGSMEWNMVNVAILLMIKGKWIN 235

  Fly   172 IGGFIKTWLPFAILLSIFTIL 192
            ....::::||.|::.|:..:|
plant   236 GSSVVRSFLPCAVVTSLGVVL 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8372NP_723362.1 DUF778 53..169 CDD:428540 50/172 (29%)
RTE1NP_001324625.1 DUF778 60..233 CDD:428540 50/172 (29%)

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