DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)205 and cbx8b

DIOPT Version :9

Sequence 1:NP_476755.1 Gene:Su(var)205 / 34119 FlyBaseID:FBgn0003607 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_001019586.1 Gene:cbx8b / 799361 ZFINID:ZDB-GENE-050522-325 Length:361 Species:Danio rerio


Alignment Length:282 Identity:62/282 - (21%)
Similarity:94/282 - (33%) Gaps:102/282 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EEEYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASRKDEEKSAASKK 85
            |..:|.|.||.||:|:|.:||.:||||:....:|||||.|:....|...:|...::.|.....|:
Zfish     8 ERVFAAESIIKRRIRRGHMEYLVKWKGWSPKYSTWEPEENILDPRLFVAFEEREREREIFGPKKR 72

  Fly    86 D--------RPSSSAKAKETQGRASSS-------------------------------TSTAS-- 109
            .        :..:..|||..:.|..||                               .||.:  
Zfish    73 GPKLKTFLLKAQAKEKAKSYEFRNDSSRGIHVTYSSPEPVVAPRAREGLRAVVPTIFPPSTVNRG 137

  Fly   110 ---KRKSEEPTAPSGNKSKRTTDAEQDTIPVSG-------STGFDRGLEAEKILGASDN------ 158
               :.:|.||.......|.|.||....|....|       :.|:...|..|.:..|:|.      
Zfish   138 ESVRLQSPEPREHHSPHSPRPTDEFSLTPKKRGRKPKLRFTDGYTSNLHPEHVKRAADETMASIP 202

  Fly   159 ------------------NGRLTFLIQFKGVD------QAEMVPSSVANEKIPRMVI-------- 191
                              :|||.  |..|.:|      |:.::||.......|:..:        
Zfish   203 SKMAKLGLGEDDERCPDISGRLK--ISHKDLDATCSHKQSNVIPSRSTLHISPQWSLHSSRMEAG 265

  Fly   192 -----------HFYEERLSWYS 202
                       ||:::.|..||
Zfish   266 LLGHRTNPQSNHFHQKHLKHYS 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)205NP_476755.1 CHROMO 24..72 CDD:237991 21/47 (45%)
ChSh 141..202 CDD:197638 18/109 (17%)
cbx8bNP_001019586.1 Chromo 14..57 CDD:278797 20/42 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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