DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)205 and CBX8

DIOPT Version :9

Sequence 1:NP_476755.1 Gene:Su(var)205 / 34119 FlyBaseID:FBgn0003607 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_065700.1 Gene:CBX8 / 57332 HGNCID:15962 Length:389 Species:Homo sapiens


Alignment Length:157 Identity:42/157 - (26%)
Similarity:67/157 - (42%) Gaps:47/157 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EEEYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASRKDEEKSAASKK 85
            |..:|.|.::.||:|||::||.:||||:.:..:|||||.|:....|:..:|...::.|.....|:
Human     8 ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEEREREMELYGPKKR 72

  Fly    86 D--------RPSSSAKAKETQGRA------------------------------------SSSTS 106
            .        :..:.||||..:.|:                                    :||||
Human    73 GPKPKTFLLKAQAKAKAKTYEFRSDSARGIRIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTS 137

  Fly   107 TASKRKSEEPTAPSGNKSKRTTDAEQD 133
            |:|..::|   ||......|..|.|:|
Human   138 TSSTCRAE---APRDRDRDRDRDRERD 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)205NP_476755.1 CHROMO 24..72 CDD:237991 20/47 (43%)
ChSh 141..202 CDD:197638
CBX8NP_065700.1 CHROMO 10..62 CDD:214605 21/51 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..241 13/41 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..327
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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