DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)205 and zfp36l2.1

DIOPT Version :9

Sequence 1:NP_476755.1 Gene:Su(var)205 / 34119 FlyBaseID:FBgn0003607 Length:206 Species:Drosophila melanogaster
Sequence 2:XP_012816595.1 Gene:zfp36l2.1 / 549576 XenbaseID:XB-GENE-5835930 Length:281 Species:Xenopus tropicalis


Alignment Length:34 Identity:9/34 - (26%)
Similarity:12/34 - (35%) Gaps:6/34 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 DRPSSSAKAKETQGRASSSTSTASKRKSEEPTAP 119
            ||..|..|      .:|.|.|.:......:|..|
 Frog   199 DRWGSGTK------NSSGSLSPSDPDPDSDPGTP 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)205NP_476755.1 CHROMO 24..72 CDD:237991
ChSh 141..202 CDD:197638
zfp36l2.1XP_012816595.1 CTH1 <27..170 CDD:227395
zf-CCCH 172..195 CDD:366217
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I8624
eggNOG 1 0.900 - - E1_KOG1911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000191
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X422
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.860

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