DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)205 and Cbx7

DIOPT Version :9

Sequence 1:NP_476755.1 Gene:Su(var)205 / 34119 FlyBaseID:FBgn0003607 Length:206 Species:Drosophila melanogaster
Sequence 2:XP_006521207.1 Gene:Cbx7 / 52609 MGIID:1196439 Length:251 Species:Mus musculus


Alignment Length:111 Identity:39/111 - (35%)
Similarity:57/111 - (51%) Gaps:19/111 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EEEYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASRKDEEKSAASKK 85
            |:.:|||.|..:|||||||||.:||||:|...:|||||.::....|:..|| .:::.::::..:|
Mouse     8 EQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYE-EKEERDRASGYRK 71

  Fly    86 DRPS---------------SSAKAKETQGRASSSTSTASKRKSEEP 116
            ..|.               ||.|||   |......|.|...:|..|
Mouse    72 RGPKPRRLLLQRLYSMDLRSSHKAK---GNEKLCFSLARPLRSGSP 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)205NP_476755.1 CHROMO 24..72 CDD:237991 25/47 (53%)
ChSh 141..202 CDD:197638
Cbx7XP_006521207.1 CD_Cbx7 7..62 CDD:349293 27/54 (50%)
CBX7_C 209..240 CDD:375056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S3980
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 1 1.000 - - FOG0000191
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.870

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