DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)205 and cbx1b

DIOPT Version :9

Sequence 1:NP_476755.1 Gene:Su(var)205 / 34119 FlyBaseID:FBgn0003607 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_001002090.1 Gene:cbx1b / 415180 ZFINID:ZDB-GENE-040625-68 Length:203 Species:Danio rerio


Alignment Length:202 Identity:87/202 - (43%)
Similarity:121/202 - (59%) Gaps:41/202 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GKKIDNPESSAKVSD-AEEEEEEYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQD 65
            |||    ::..||.: .|||||||.|||::||||.||||||.|||||:.:.:|||||:.||||.|
Zfish    29 GKK----QNKKKVEEVVEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPDENLDCPD 89

  Fly    66 LIQQYEASRKDEEKSAASKKDRPSSSAKAKETQGRASSSTSTASKRKSEEPTAPSGNKSKRTTDA 130
            ||.::..|:|..|...   |.|..:....|||            |::.:||     .|.:     
Zfish    90 LIAEFLQSQKTAESGG---KRRAETDGDGKET------------KKRKDEP-----EKLR----- 129

  Fly   131 EQDTIPVSGSTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYE 195
                       ||.|||:.|:|:||:|::|.|.||:::|..|:|::||:..||.|.|::||.|||
Zfish   130 -----------GFARGLDPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYE 183

  Fly   196 ERLSWYS 202
            |||:|:|
Zfish   184 ERLTWHS 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)205NP_476755.1 CHROMO 24..72 CDD:237991 31/47 (66%)
ChSh 141..202 CDD:197638 32/60 (53%)
cbx1bNP_001002090.1 Chromo 54..97 CDD:278797 27/42 (64%)
Chromo_shadow 136..187 CDD:279701 25/50 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596522
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1911
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 1 1.000 - - FOG0000191
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22812
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10651
SonicParanoid 1 1.000 - - X422
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.840

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