DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)205 and Cbx8

DIOPT Version :9

Sequence 1:NP_476755.1 Gene:Su(var)205 / 34119 FlyBaseID:FBgn0003607 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_038954.1 Gene:Cbx8 / 30951 MGIID:1353589 Length:362 Species:Mus musculus


Alignment Length:251 Identity:59/251 - (23%)
Similarity:96/251 - (38%) Gaps:80/251 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EEEYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASRKDEEKSAASKK 85
            |..:|.|.::.||:|||::||.:||||:.:..:|||||.|:....|:..:|...::.|.....|:
Mouse     8 ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEEREREMELYGPKKR 72

  Fly    86 D--------RPSSSAKAK-------ETQG-----------------RA------------SSSTS 106
            .        :..:.||||       .|:|                 ||            .||||
Mouse    73 GPKPKTFLLKAQAKAKAKTYEFRSDSTRGIRIPYPGRSPQDLASTSRAREGLRNTGLPPPGSSTS 137

  Fly   107 T---------------ASKRKSEEPTAPSGNKSKRTTDAEQDTIPVS------GSTGFDRGLEAE 150
            |               .:.|..::|::|..:..||.....::.:..|      .|.|....|:..
Mouse   138 TCRADPPRDRDRERDRGTSRVDDKPSSPGDSSKKRGPKPRKEPLDPSQRPLGEPSAGLGEYLKGR 202

  Fly   151 KILGASDNNGRLT---FLIQFKGVDQAEMV------PSS------VANEKIPRMVI 191
            |:...|...|:..   .:||......:::|      |||      :|.:..|..||
Mouse   203 KLDETSSGTGKFPAGHSVIQLARRQDSDLVQYGVTSPSSAEASSKLAVDTFPARVI 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)205NP_476755.1 CHROMO 24..72 CDD:237991 20/47 (43%)
ChSh 141..202 CDD:197638 15/66 (23%)
Cbx8NP_038954.1 CHROMO 10..62 CDD:214605 21/51 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..197 18/106 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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