Protein Alignment Su(var)205 and Cbx5

DIOPT Version :10

• Sequence 1: NP_476755.1
• Gene: Su(var)205 / 34119
• FlyBaseID: FBgn0003607
• Length: 206
• Species: Drosophila melanogaster
• Sequence 2: NP_001100267.1
• Gene: Cbx5 / 300266
• RGDID: 1306619
• Length: 191
• Species: Rattus norvegicus
• Alignment Length: 206
• Identity: 87/206 - (42%)
• Similarity: 120/206 - (58%)
• Gaps: 26/206 - (12%)

  Fly     1 MGKKIDNPESSAKVSDAEEEEEEYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQD 65
            ||||......|:    :.|:||||.|||::|||:.||:|||.|||||:.|..||||||.||||.:
  Rat     1 MGKKTKRTADSS----SSEDEEEYVVEKVLDRRMVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPE 61

  Fly    66 LIQQYEASRKDEEKSAASKKDRPSSSAKAKETQGRASSSTSTASKRKSEEPTAPSGNKSKRTTDA 130
            ||.::....|                 |.||.:.......|..:||||....:....|||:..:.
  Rat    62 LISEFMKKYK-----------------KMKEGENNKPREKSEGNKRKSSFSNSADDIKSKKKREQ 109

  Fly   131 EQDTIPVSGSTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYE 195
            ..|.     :.||:||||.|||:||:|:.|.|.||:::|..|:|::|.:..||.|.|::||.|||
  Rat   110 SNDI-----ARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYE 169

  Fly   196 ERLSWYSDNED 206
            |||:|::..||
  Rat   170 ERLTWHAYPED 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Su(var)205	NP_476755.1	CD_HP1a_insect	24..72	CDD:349300	30/47 (64%)
		CSD_HP1a_insect	146..198	CDD:349305	27/51 (53%)
Cbx5	NP_001100267.1	CD_HP1alpha_Cbx5	19..68	CDD:349298	31/48 (65%)
		CSD_HP1alpha_Cbx5	116..173	CDD:349302	31/56 (55%)