DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)205 and CBX6

DIOPT Version :9

Sequence 1:NP_476755.1 Gene:Su(var)205 / 34119 FlyBaseID:FBgn0003607 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_055107.3 Gene:CBX6 / 23466 HGNCID:1556 Length:412 Species:Homo sapiens


Alignment Length:207 Identity:48/207 - (23%)
Similarity:79/207 - (38%) Gaps:51/207 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EEEYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASRKDEEKSAASKK 85
            |..:|.|.||.||:|||::||.:||||:....:|||||.|:....||..:|...::.|.....|:
Human     8 ERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERERELYGPKKR 72

  Fly    86 D--------------------------RPSSSAKAKETQGRAS--------SSTSTASKRKSEEP 116
            .                          :||:||.:.:....|:        ......|:|....|
Human    73 GPKPKTFLLKARAQAEALRISDVHFSVKPSASASSPKLHSSAAVHRLKKDIRRCHRMSRRPLPRP 137

  Fly   117 TAPSGNKSKRTTDAEQDTIPVSGSTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQ------AE 175
            ....|:...|.        |:|..:...|.:. .|:........|:  ::..|.:|:      |.
Human   138 DPQGGSPGLRP--------PISPFSETVRIIN-RKVKPREPKRNRI--ILNLKVIDKGAGGGGAG 191

  Fly   176 MVPSSVANEKIP 187
            ....::|..|:|
Human   192 QGAGALARPKVP 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)205NP_476755.1 CHROMO 24..72 CDD:237991 23/47 (49%)
ChSh 141..202 CDD:197638 9/53 (17%)
CBX6NP_055107.3 CHROMO 10..62 CDD:214605 24/51 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..152 6/32 (19%)
DNA_pol3_gamma3 <237..>331 CDD:331207
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..364
CBX7_C 357..388 CDD:319236
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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