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Protein Alignment Su(var)205 and cec-4
DIOPT Version :9
| Sequence 1: | NP_476755.1 |
Gene: | Su(var)205 / 34119 |
FlyBaseID: | FBgn0003607 |
Length: | 206 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_501231.1 |
Gene: | cec-4 / 177536 |
WormBaseID: | WBGene00017990 |
Length: | 270 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 162 |
Identity: | 47/162 - (29%) |
| Similarity: | 70/162 - (43%) |
Gaps: | 29/162 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 GKKIDNPESSAKVSD-------------AEEEEEEYAVEKIIDRRVRKGKVEYYLKWKGYPE--- 50
||.|...|...|..| :::...|||||:::..|..||...|.::|||||.
Worm 52 GKTITATEFDFKGDDSLLSTYKKKVTKQSDDSSGEYAVERVLAHRKVKGSPLYLVQWKGYPHPVW 116
Fly 51 TENTWEPENNLD-CQDLIQQYEASRKDEEKSAASKKDRPSSSAKAKETQGRASSSTSTASKRKSE 114
....| |.:|| |:||:..|:..::| .|.|.:.|..||.:.| |..:.....:.:.:...:..
Worm 117 NSEMW--EEDLDNCKDLLAAYKKHQED-LKIAQTPKKTPSKTPK-KTPKSLKRRALTPSDDEEEA 177
Fly 115 EPTAP--------SGNKSKRTTDAEQDTIPVS 138
.|.|| |..|.||||..|.:.:..|
Worm 178 GPIAPEPKKTPKQSTKKLKRTTSPETNLVEKS 209
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Su(var)205 | NP_476755.1 |
CHROMO |
24..72 |
CDD:237991 |
21/51 (41%) |
| ChSh |
141..202 |
CDD:197638 |
|
| cec-4 | NP_501231.1 |
CHROMO |
86..140 |
CDD:214605 |
22/55 (40%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1911 |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| Isobase |
0 | 0.000 |
Not matched by this tool. |
| OMA |
1 |
1.010 |
- |
- |
|
QHG54478 |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1628171at2759 |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.830 |
|
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