Sequence 1: | NP_609193.1 | Gene: | CG8419 / 34118 | FlyBaseID: | FBgn0031999 | Length: | 921 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038948510.1 | Gene: | Trim3 / 83616 | RGDID: | 70074 | Length: | 750 | Species: | Rattus norvegicus |
Alignment Length: | 586 | Identity: | 122/586 - (20%) |
---|---|---|---|
Similarity: | 200/586 - (34%) | Gaps: | 184/586 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 291 RPSTP-PENTVIFTDDLKCGICLDVYTDPRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPS 354
Fly 355 NYSLRSEMGGSSAELTATVSPARQRGSSFTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFAS 419
Fly 420 EVSTRCIRCHTCNYPTDLSLGGVRQLPQNYLLVRRIEVLRLQA------GED------VISRVWC 472
Fly 473 SLCTEEISATYH------CISCTLNLCTLCKEAHERQRSTASHRMRSILELRRARKQKQQQMGLG 531
Fly 532 DSSKLVLRCGIHTNFELKAFCTNCRQLACTDCLVILHKGHRHETISRAIGHQGKLLKEATDQTRP 596
Fly 597 LCQYAEHSIERLNAIARGINDRCDDIQTQVERYMQQYMDALTVHRKTLLQQISRARESKVEVVLK 661
Fly 662 QQLDLEKRTQQAM-DAVRFSQELCEIGADVEILSYVTILLRRLEYCQQFKPPVDPKISDSLHFLP 725
Fly 726 KIRAPSTKDQRDIPLYG--IITMQVVEPSLCTLEWEGFSQLRLHKKADLLLHSRDADGVSLCHGG 788
Fly 789 LEINCMLKYKDSSSKFLPVEVSDNRDGTYNISFTPDAQGTLILTITINDRPIKGGPFTFQARQVR 853
Fly 854 P 854 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8419 | NP_609193.1 | RING | 308..>334 | CDD:214546 | 15/25 (60%) |
zf-B_box | 537..576 | CDD:279037 | 1/38 (3%) | ||
iSH2_PI3K_IA_R | 583..703 | CDD:304922 | 25/120 (21%) | ||
Filamin | 748..846 | CDD:279024 | 26/97 (27%) | ||
IG_FLMN | 751..849 | CDD:214720 | 27/97 (28%) | ||
Trim3 | XP_038948510.1 | RING-HC_TRIM3 | 19..63 | CDD:319682 | 23/126 (18%) |
Bbox_SF | 107..159 | CDD:412124 | 11/53 (21%) | ||
BBC | 164..290 | CDD:128778 | 35/191 (18%) | ||
IG_FLMN | 328..425 | CDD:214720 | 28/102 (27%) | ||
NHL_TRIM2_like | 477..750 | CDD:271330 | |||
NHL repeat | 495..534 | CDD:271330 | |||
NHL repeat | 542..581 | CDD:271330 | |||
NHL repeat | 584..620 | CDD:271330 | |||
NHL repeat | 628..668 | CDD:271330 | |||
NHL repeat | 677..717 | CDD:271330 | |||
NHL repeat | 720..746 | CDD:271330 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D489543at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |