DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8419 and RNF208

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_001375226.1 Gene:RNF208 / 727800 HGNCID:25420 Length:261 Species:Homo sapiens


Alignment Length:196 Identity:53/196 - (27%)
Similarity:77/196 - (39%) Gaps:51/196 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 DSGSEPTSSLAGGGSSTSPESLLDNILSGASSVSVQSSSSSQASNATVAQPIKAKEQLHPKRLLS 224
            |.|.|..|...|         ||.:.|.|..                |...::|.:.:||::...
Human     4 DPGPEAGSGWPG---------LLMSCLKGPH----------------VILKMEAMKIVHPEKFPE 43

  Fly   225 LKASPELRVSP-PTPDTTQPQVQMP--TQLLLSLT---PRPEVFDAP--SPLTRSPSRSPGIS-- 279
            |.|:|....:| ||| |..|:...|  |:::::..   ..|.:..||  .||.|.|.:  |.|  
Human    44 LPAAPCFPPAPRPTP-TLAPKRAWPSDTEIIVNQACGGDMPALEGAPHTPPLPRRPRK--GSSEL 105

  Fly   280 --PPVSPSPSITLR-------PSTPPENTVIFTDDLKCGICLDVYT----DPRTLHCLHSFCLQC 331
              |.|:|...:.:.       ||....::....:.|:|..|...|.    .||.|.||||.|.||
Human   106 GFPRVAPEDEVIVNQYVIRPGPSASAASSAAAGEPLECPTCGHSYNVTQRRPRVLSCLHSVCEQC 170

  Fly   332 L 332
            |
Human   171 L 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 14/29 (48%)
zf-B_box 537..576 CDD:279037
iSH2_PI3K_IA_R 583..703 CDD:304922
Filamin 748..846 CDD:279024
IG_FLMN 751..849 CDD:214720
RNF208NP_001375226.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..106 9/24 (38%)
RING-HC_RNF208 140..193 CDD:319473 15/32 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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