DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8419 and Trim32

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_001155254.1 Gene:Trim32 / 69807 MGIID:1917057 Length:655 Species:Mus musculus


Alignment Length:689 Identity:116/689 - (16%)
Similarity:206/689 - (29%) Gaps:277/689 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 LKCGICLDVYTD----PRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSS 366
            |:|.||::.:|:    |:.|||.|:.|.|||       |.|               |.|.:.|  
Mouse    19 LECPICMESFTEEQLRPKLLHCGHTICRQCL-------EKL---------------LASSING-- 59

  Fly   367 AELTATVSPARQRGSSFTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFASEVSTRCIRCHTC 431
                                                                       :||..|
Mouse    60 -----------------------------------------------------------VRCPFC 65

  Fly   432 NYPTDLSLGGVRQLPQNYLLVRRIEVLRLQAGEDVISRVWCSLCTEEISATYHCISCTLNLCTLC 496
            :..|.::  .:.||..|..:::.|:...|   .:.:..:.|..|...:...: |.||.:.||..|
Mouse    66 SKITRIT--SLTQLTDNLTVLKIIDTAGL---SEAVGLLMCRGCGRRLPRQF-CRSCGVVLCEPC 124

  Fly   497 KEAHERQ--------RSTASHRMRSILE-LRRAR----KQKQQQMGLGDSSKLVLRCGIHTNFEL 548
            :||..:.        :..|..|.|...| |.|.|    :.::::..|...|:           :|
Mouse   125 READHQPPGHCTLPVKEAAEERRRDFGEKLTRLRELTGELQRRKAALEGVSR-----------DL 178

  Fly   549 KAFCTNCRQLACTDCLVILHKGHRHETISRAIGHQGKLLKEATDQTRPL------------CQYA 601
            :|                     |::.:.:..||:.:.::|...::|..            .|..
Mouse   179 QA---------------------RYKAVLQEYGHEERRIQEELARSRKFFTGSLAEVEKSNSQVV 222

  Fly   602 EHSIERLNAIARGINDRCDDIQTQVERYMQQYMDALTVHRKTLLQQISRARESKVEVVLKQQLDL 666
            |.....||........|||....::::     .|.      .||::.:...|.::...|.::|.|
Mouse   223 EEQSYLLNIAEVQAVSRCDYFLAKIKQ-----ADV------ALLEETADEEEPELTASLPRELTL 276

  Fly   667 EKRTQQAMDAVRFSQELCEIGADVEIL-----------------------------------SYV 696
            :                     |||:|                                   :..
Mouse   277 Q---------------------DVELLKVGHVGPLQIGQAVKKPRTVNMEDSWAGEEGAASSASA 320

  Fly   697 TILLRRLEYCQQFKPPVDPKISDSLH-------------FLPKIRAP-STKDQRDIPLYGIITMQ 747
            ::..|.::...:...| .|:.|.:..             ||.|:.|. ||....::|    :::.
Mouse   321 SVTFREMDMSPEEVAP-SPRASPAKQRSSEAASGIQQCLFLKKMGAKGSTPGMFNLP----VSLY 380

  Fly   748 VVEPSLCTLEWEGFSQLRLHKKADLLLHSR--------------DADGVSLCHGGLEINC--MLK 796
            |...|...:...|..::::..:...|...|              .||..:|....:.:||  ::.
Mouse   381 VTSQSEVLVADRGNYRIQVFNRKGFLKEIRRSPSGIDSFVLSFLGADLPNLTPLSVAMNCHGLIG 445

  Fly   797 YKDSSSKFLPVEVSDNR---------DGTYNISFTPDAQGTLILTITINDRPIKGGP---FTFQA 849
            ..||....|.|...|..         ...:.|:..|..|      ..:.|  ::||.   ||   
Mouse   446 VTDSYDNSLKVYTMDGHCVACHRSQLSKPWGITALPSGQ------FVVTD--VEGGKLWCFT--- 499

  Fly   850 RQVRPHTGIYHCCSFCSGKGNRNVMCSCEGHMPGYSGCG 888
              |....|:......||....:.|.|..||.:....|.|
Mouse   500 --VDRGAGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLG 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 13/29 (45%)
zf-B_box 537..576 CDD:279037 3/38 (8%)
iSH2_PI3K_IA_R 583..703 CDD:304922 21/166 (13%)
Filamin 748..846 CDD:279024 21/125 (17%)
IG_FLMN 751..849 CDD:214720 22/125 (18%)
Trim32NP_001155254.1 RING-HC_TRIM32_C-VII 20..66 CDD:319501 20/128 (16%)
RING-HC finger (C3HC4-type) 21..65 CDD:319501 20/126 (16%)
Bbox1_TRIM32_C-VII 99..139 CDD:380864 10/40 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..347 3/20 (15%)
NHL 1 360..403 9/46 (20%)
NHL_TRIM32_like 364..646 CDD:271331 37/190 (19%)
NHL repeat 376..416 CDD:271331 6/43 (14%)
NHL 2 417..460 9/42 (21%)
NHL repeat 433..472 CDD:271331 7/38 (18%)
NHL 3 461..501 8/52 (15%)
NHL repeat 474..514 CDD:271331 10/52 (19%)
NHL repeat 515..566 CDD:271331 6/22 (27%)
NHL 4 564..607
NHL repeat 579..611 CDD:271331
NHL 5 608..648
NHL repeat 619..645 CDD:271331
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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