DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8419 and rnf207b

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_001188378.1 Gene:rnf207b / 568322 ZFINID:ZDB-GENE-080227-9 Length:634 Species:Danio rerio


Alignment Length:589 Identity:104/589 - (17%)
Similarity:186/589 - (31%) Gaps:209/589 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 LKCGICLDVYTDPRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEPSNYSLRSEMGGSSAELT 370
            |.|.:|.:.|..|..|.|.|:||..||                                      
Zfish    23 LVCHLCQEQYEHPCLLDCYHTFCASCL-------------------------------------- 49

  Fly   371 ATVSPARQRGSSFTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFASEVSTRCIRCHTCNYPT 435
                    ||                                       .|:...:.|..|.:.:
Zfish    50 --------RG---------------------------------------RVADSRLTCPVCGHQS 67

  Fly   436 DLSLGGVRQLPQNYLLVRRIEVLRLQAGEDVISRVWCSLC-----TEEISATYHCISCTLNLCTL 495
            .:.  |:..||....|::.:    :.:..|....|.|:.|     .:::.|.|:|.:|...||..
Zfish    68 VVK--GINALPPEDRLLKFL----VDSSADSEETVQCANCDLECKKQDVDAMYYCNTCCQPLCRD 126

  Fly   496 CKEAHERQRSTASHRMRSILELRRARKQKQQQMGLGDSSKLVLRCGIHTNFELKAFCTNCRQLAC 560
            |:|...:.:..:.|.:.|:     |::.|:...          :|.:|..|.: .|.|..:.:.|
Zfish   127 CRETTHKAKMFSRHEIVSL-----AKRTKEAHK----------KCALHEEFYI-MFSTEKKSMLC 175

  Fly   561 TDCLVILHKGHRHETISRAIGH-QG-KLLKEATDQTRPLCQYAEHSIERLNAIARGINDRCDDIQ 623
            .:|...:....|...|.....: || :.|.:|....:.|...|..:|..|.|:...:....|:.:
Zfish   176 INCFRDMQVESRAHCIDIETAYIQGCEKLDQAVLAVKELQMSAREAIILLKAMIGEVRANVDEEE 240

  Fly   624 TQVERYMQQYMDALTVHRKTLLQQISRARESKVEVVLKQQLD------------LEKRTQQAMDA 676
            :.:........:.| ..||.:|.:.:|::..:.|...|:||.            |...:.....|
Zfish   241 SAICTLFSNMQEKL-AERKKILLKAARSQHEEKERTFKEQLSHLAALLPTLQVHLVTCSAFLSSA 304

  Fly   677 VRFSQELCEIGAD-VEILSYVTILLRRL----------EYCQQFKPPVDPKISDSLHFLPKIRAP 730
            .:|  |..::|.. :|.|..:..|..||          ||..:|...::|     |..|.:.|:.
Zfish   305 NKF--EFLDMGYQLMERLKKIVKLPHRLRPTQSSKINTEYRSEFARCLEP-----LLLLGQRRSM 362

  Fly   731 STKDQRDIPLYGIITMQVVEPSLCTLEWEGFSQLRLHKKADLLLHSRDADGVSLCHGGLEINCML 795
            ||.        |.:.:.:...|       |..|..|    .:..||.....:|||...:.     
Zfish   363 STT--------GSVALALGNAS-------GLMQSSL----SVQCHSPAMSDMSLCSSVVR----- 403

  Fly   796 KYKDSSSKFLPVEVSDNRDGTYNISFTPDAQGTLILTITINDRPIKGGPFTFQARQVRPHTGIYH 860
              :.:|.:::..:|                    :|.        |||...|          :.|
Zfish   404 --RPTSHRYISTKV--------------------LLA--------KGGETPF----------MEH 428

  Fly   861 CCSF 864
            ||::
Zfish   429 CCNY 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 11/25 (44%)
zf-B_box 537..576 CDD:279037 8/38 (21%)
iSH2_PI3K_IA_R 583..703 CDD:304922 27/133 (20%)
Filamin 748..846 CDD:279024 15/97 (15%)
IG_FLMN 751..849 CDD:214720 16/97 (16%)
rnf207bNP_001188378.1 RING 25..63 CDD:214546 15/122 (12%)
zf-B_box 98..145 CDD:279037 11/46 (24%)
iSH2_PI3K_IA_R 202..310 CDD:304922 21/110 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 575..634
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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