DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8419 and trim32

DIOPT Version :9

Sequence 1:NP_609193.1 Gene:CG8419 / 34118 FlyBaseID:FBgn0031999 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_001107066.1 Gene:trim32 / 562764 ZFINID:ZDB-GENE-060428-1 Length:663 Species:Danio rerio


Alignment Length:612 Identity:107/612 - (17%)
Similarity:184/612 - (30%) Gaps:260/612 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 STPPENTVIFTDDLKCGICLDVYTD----PRTLHCLHSFCLQCLVSENFKDESLWDQDQARSEEP 353
            |..||   :..:.|:|.|||:.|..    |:.|.|.||.|.|||       |.|           
Zfish     6 SLDPE---LVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCL-------EKL----------- 49

  Fly   354 SNYSLRSEMGGSSAELTATVSPARQRGSSFTLRRKKSMDRLVIRSKSDGKRSTSSIGTRFTGSFA 418
                |.|.:.|                                                      
Zfish    50 ----LASTING------------------------------------------------------ 56

  Fly   419 SEVSTRCIRCHTCNYPTDLSLGGVRQLPQNYLLVRRIEVLRLQAGEDVISRVWCSLCTEEISATY 483
                   :||..|:..:.:|  .:.||..|..:::.|:.....:..   ..:.|..|...:...|
Zfish    57 -------VRCPFCSKVSRMS--SISQLADNLTVLKIIDCASACSSN---MGLMCKSCKNRLPRQY 109

  Fly   484 HCISCTLNLCTLCK-EAHERQRSTASHRMRSILELRRARKQKQQQMGLGDSSKLVLRCGIHTNFE 547
             |..|::.||.:|| |.|:||.... ..:|...||||                            
Zfish   110 -CCDCSIVLCDICKNEGHQRQGHVV-QAIRMAAELRR---------------------------- 144

  Fly   548 LKAFCTNCRQLACTDCLVILHKGHRHETISRAIGHQGKLLKEATDQTRPLCQYAEHSIERLNAIA 612
                                          :.||.:...|:||..           :|::..|  
Zfish   145 ------------------------------KDIGAKLSDLREAMG-----------NIQKKKA-- 166

  Fly   613 RGINDRCDDIQTQVERYMQQYMDALTVHRKTLLQQISRARESKVEVVLKQQLDLEKRTQQAMDAV 677
             .|::....::.:.:...|:|                    :|.|:.|:::|...:|.       
Zfish   167 -AIDNVTKSLRMKYKAVQQEY--------------------AKAELRLQEELGRSRRA------- 203

  Fly   678 RFSQELCEI-GADVEILSYVTILLRRLEYCQQFKPPVDPKISDSLHFLPKIRAPSTKDQRDIPLY 741
             |:..|.|| ..:.:||...|.||.                      :.:::..|..|       
Zfish   204 -FAASLAEIEKLNAQILEEQTYLLN----------------------IAEVQVVSRCD------- 238

  Fly   742 GIITMQVVEPSLCTLEWEGFS-----QLRLHKKADLLLHSRDADGVSLCHGGLEINCMLKYKDSS 801
             .:||::.:..:..|| ||.:     .|.|.....::|..:|.:.|.     :|.:..|:....:
Zfish   239 -YLTMRIKQTDIALLE-EGSNNDEEEDLDLKTNLPVVLKLQDPELVK-----IENSKSLEVGQLT 296

  Fly   802 SKFLPVEVSDNRDGTYNISFTPDAQGTLILTITIN-----DRPIKGGPFTFQARQV-----RPHT 856
            :|...|.|.:..||   :.|.......|.:...|:     :..:...|.:|:::.|     .|..
Zfish   297 TKPCNVNVEEEEDG---LDFPTATSAPLDIYRDIDMVPAVEEAVCASPGSFKSKSVDGGGPSPGA 358

  Fly   857 GIYHCCSFCSGKGNRNVMCSCEGHMPG 883
            .....|.|....|       |:|::||
Zfish   359 SGGQLCQFVKKMG-------CKGNLPG 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8419NP_609193.1 RING 308..>334 CDD:214546 14/29 (48%)
zf-B_box 537..576 CDD:279037 0/38 (0%)
iSH2_PI3K_IA_R 583..703 CDD:304922 22/120 (18%)
Filamin 748..846 CDD:279024 20/107 (19%)
IG_FLMN 751..849 CDD:214720 21/107 (20%)
trim32NP_001107066.1 zf-RING_UBOX 18..60 CDD:290181 20/124 (16%)
BBOX 96..136 CDD:197662 13/41 (32%)
NHL_TRIM32_like 371..653 CDD:271331 5/15 (33%)
NHL repeat 383..423 CDD:271331
NHL repeat 440..478 CDD:271331
NHL repeat 481..521 CDD:271331
NHL repeat 522..573 CDD:271331
NHL repeat 586..618 CDD:271331
NHL repeat 626..652 CDD:271331
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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